IBS Biomedical Mathematics Online Colloquium

bioinformatics computational biology physiology systems biology general mathematics

Audience:	Researchers in the discipline
Seminar series times:	No fixed schedule
Organizer:	Jae Kyoung Kim*
	*contact for this listing

IBS Biomedical Mathematics Colloquium series focuses on progress in outstanding mathematical theory for the study of biology and medicine and its application. This will be a great chance for individuals and groups to hear from outstanding researchers and discuss with them from your place. The colloquium runs either Wed 16:00 or Thu 11:00 Korea time depending on speakers’ time zone. It consists of a 50-minute talk followed by 10-minute questions. After the formal session, longer discussions will take place for those interested. The zoom link will be opened at least 10 minutes before the start time, to let people meet and have a coffee together. So, join us for an informal chat!

IBS Biomedical Mathematics Group (BIMAG) is established in March 2021 to carry out top-class research in the field of biological and medical mathematics. BIMAG consists of three research teams: Intracellular dynamics team aims for the development of reduction methods for multi-scale systems and its application to enzyme kinetics, cancer Immunotherapy, and biological oscillators. Intercellular dynamics team aims for the development of inference methods for dynamic cellular networks and its application to biological oscillatory networks. Systemic dynamics team aims for the development of digital medicine for sleep disorders based on health wearable devices.

Upcoming talks

Past talks

Your time			Speaker	Title
Fri	Dec 08	02:00	Robyn P. Araujo	Cellular cognition and the simple complexity of the networks of life
Wed	Nov 22	07:00	Alfio Quarteroni	Physics-based and data-driven numerical models for computational medicine
Fri	Nov 17	02:00	Samuel Isaacson	Spatial Particle Modeling of Immune Processes
Fri	Nov 10	02:00	Matthew Simpson	Efficient prediction, estimation and identifiability analysis with mechanistic mathematical models
Wed	Nov 01	07:00	Eder Zavala	Quantitative analysis of high-resolution daily profiles of HPA axis hormones
Fri	Oct 20	02:00	Tetsuya J. Kobayashi	Optimality of Biological Information Processing
Wed	Sep 20	07:00	Sebastian Walcher	Reaction networks: Reduction of dimension and critical parameters
Fri	Jun 09	02:00	Sushmita Roy	Deciphering gene regulatory networks underlying cell-fate specification
Wed	May 24	07:00	Thomas Philipp	Stochastic gene expression in lineage trees
Wed	May 10	07:00	Morgen Jensen	DNA repair and chaos in CellsBD
Fri	Apr 28	02:00	Hans P.A. Van Dongen	Modeling the temporal dynamics of neurobehavioral performance impairment due to sleep loss and circadian misalignment
Fri	Apr 07	02:00	George Karniadakis	BINNS: Biophysics-Informed Neural Networks
Fri	Mar 24	07:00	Stefan Bauer	Neural causal models for experimental design
Wed	Mar 15	07:00	Saez-Rodriguez, Julio	Dynamic logic models complement machine learning for personalized medicine
Fri	Mar 10	01:00	Martin Nowak	Evolution of cooperation
Fri	Mar 03	02:00	Shinya Kuroda	Systems biology of insulin action
Fri	Dec 09	02:00	George Sugihara	Taming Complexity in Data-Limited Nonlinear Nonequilibrium Settings
Fri	Dec 02	02:00	Domitilla Del Vecchio	Mammalian synthetic biology by controller design
Wed	Nov 30	07:00	Svetlana Postnava	Brain dynamics during shiftwork: from maths and codes to real-world applications
Wed	Nov 23	07:00	Edda Klipp	Assessing the limits of control of Covid-19 outbreaks using agent-based modeling
Fri	Nov 18	02:00	Rosemary Braun	Quantifying dynamical changes in sparse, noisy, high-dimensional data
Wed	Nov 09	07:00	Marko Okada	Modeling cell-to-cell heterogeneity from a signaling network
Wed	Oct 26	07:00	Anne Skeldon	Mathematical Modelling of the sleep-wake cycle: light, clocks and social rhythms
Fri	Oct 21	02:00	David Anderson	Stationary distributions and positive recurrence of chemical reaction networks
Fri	Oct 21	01:30	David Anderson	A brief introduction to stochastic reaction networks
Fri	Oct 07	02:00	John Tyson	Time-keeping and Decision-making in the Cell Cycle
Fri	Oct 07	01:30	John Tyson	A Dynamic Paradigm for Molecular Cell Biology
Fri	Sep 02	02:00	James Ferrell	Cell signaling in 2D vs. 3D
Wed	Jun 01	08:00	Heinz Koeppl	From live cell imaging to moment-based variational inference
Wed	May 25	08:00	Radek Erban	Multi-resolution methods for modelling intracellular processes
Wed	May 25	07:30	Radek Erban	Stochastic modelling of reaction-diffusion processes
Thu	May 12	02:00	Krešimir Josić	Plasticity and balance in neuronal networks
Thu	May 12	01:30	Krešimir Josić	Introduction to balanced networks
Thu	Apr 28	02:00	Kun Hu	Scaling behaviors in physiological fluctuations: relevance to circadian regulation and insights into the development of Alzheimer’s disease
Thu	Apr 14	02:00	Denise Kirschner	A systems biology approach using multi-scale modeling to understand the immune response to tuberculosis infection and treatment
Thu	Apr 14	01:30	Denise Kirschner	An overview of methods used for multi-scale modeling and anlysis
Thu	Apr 07	02:00	Kunihiko Kaneko	Universal biology in adaptation and evolution: Dimensional reduction, and fluctuation-response relationship
Thu	Mar 31	02:00	Uri Alon	Design principles of physiological circuits
Thu	Mar 24	02:00	Mason Porter	Topological data analysis of spatial systems
Thu	Mar 24	01:30	Mason Porter	Introduction to topological data analysis
Thu	Mar 03	02:00	Qing Nie	Spatiotemporal reconstruction of static single-cell genomics data
Thu	Nov 25	09:00	Ruth Baker	Quantitative comparisons between models and data to provide new insights in cell and developmental biology
Thu	Nov 18	02:00	Jeremy Gunawardena	Following the energy in cellular information processing
Thu	Nov 11	02:00	Lisa J. Fauci	Biofluiddynamics of reproduction
Wed	Oct 27	08:00	Annabelle Ballesta	Systems Pharmacology towards Personalized Chronotherapy
Thu	Oct 21	02:00	Chao Tang	Scaling in development
Thu	Oct 07	02:00	Alexander Hoffmann	A temporal signaling code to specify immune responses
Thu	Sep 16	02:00	Aaron A. King	Stochastic processes as scientific instruments: efficient inference based on stochastic dynamical systems
Wed	Sep 08	08:00	Helen Byrne	[CANCELED] Approaches to understanding tumour-immune interactions
Thu	Sep 02	01:00	Alexander Anderson	Exploiting evolution to design better cancer therapies
Wed	Jul 28	08:00	Mustafa Khammash	Theory and design of molecular integral feedback controllers
Wed	Jul 14	08:00	Bärbel Finkenstädt Rand	Inference for Circadian Pacemaking
Thu	Jun 10	02:00	Andrew Phillpis	Towards individualized predictions of human sleep and circadian timing
Wed	May 26	08:00	Ramon Grima	Neural network aided approximation and parameter inference of stochastic models of gene expression
Wed	Apr 21	08:00	Olaf Wolkenhauer	Advice to my younger self
Thu	Apr 15	02:00	Luonan Chen	Dynamics-based data science in biology
Thu	Mar 25	02:00	Daniel Forger	The mathematics of the wearables with applications to circadian rhythms and sleep

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