BEGIN:VCALENDAR
VERSION:2.0
PRODID:researchseminars.org
CALSCALE:GREGORIAN
X-WR-CALNAME:researchseminars.org
BEGIN:VEVENT
SUMMARY:Michele Stasi (Technical University Munich)
DTSTART:20240521T140000Z
DTEND:20240521T160000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/1
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 /">Carbodiimide chemistry to drive DNA Nanotechnology</a>\nby Michele Stas
 i (Technical University Munich) as part of Systems Chemistry Discussion Se
 ries\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/SysChemDis/1/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Thomas Hermans (IMDEA Nanociencia)
DTSTART:20240613T140000Z
DTEND:20240613T150000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/2
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/2
 /">A supramolecular oscillating system</a>\nby Thomas Hermans (IMDEA Nanoc
 iencia) as part of Systems Chemistry Discussion Series\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/SysChemDis/2/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yoshiyuki Kageyama (Hokkaido University)
DTSTART:20240613T150000Z
DTEND:20240613T160000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/3
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/3
 /">Robust Dynamics of Synthetic Molecular Systems as a Consequence of Brok
 en Symmetry</a>\nby Yoshiyuki Kageyama (Hokkaido University) as part of Sy
 stems Chemistry Discussion Series\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/SysChemDis/3/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Tessel Bouwens (University of Cambridge)
DTSTART:20241030T150000Z
DTEND:20241030T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/4
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/4
 /">Application of molecular machinery in photoelectrochemical devices</a>\
 nby Tessel Bouwens (University of Cambridge) as part of Systems Chemistry 
 Discussion Series\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/SysChemDis/4/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Luis Pantaleone (University of Groningen)
DTSTART:20241212T150000Z
DTEND:20241212T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/5
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/5
 /">The role of anisotropy in polymerization motors</a>\nby Luis Pantaleone
  (University of Groningen) as part of Systems Chemistry Discussion Series\
 n\n\nAbstract\nBiopolymerization motors are a class of cytoskeletal protei
 ns that can convert chemical energy into useful mechanical work by using s
 elf-assembly to mediate the energy transduction process. One of the key ch
 allenges in replicating the function of such biological machinery\, which 
 operates in a fluid environment and at a scale dominated by Brownian motio
 n\, is to transfer the intrinsic directionality embedded in supramolecular
  architectures during the process of chemo-mechanical transduction. In thi
 s presentation we will discuss strategies aimed at differentiating the rea
 ctivity and dynamics of building blocks based on their supramolecular stru
 cture by using hierarchically structured materials with increased anisotro
 pic properties compared to traditional supramolecular polymers.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/5/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Sergey Semenov (Weizmann Institute of Science)
DTSTART:20250114T150000Z
DTEND:20250114T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/6
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/6
 /">From life-inspired materials to the origin of life: dissipative structu
 res by molecular design.</a>\nby Sergey Semenov (Weizmann Institute of Sci
 ence) as part of Systems Chemistry Discussion Series\n\n\nAbstract\nLiving
  matter functions conceptually differently from non-living matter. It is a
 ctive and is organized in\nspace and time through the interaction of five 
 major types of processes: biochemical reactions\, diffusion\,\nnoncovalent
  self-assembly\, phase separation\, and mechanical motion. This design pro
 vides adaptivity\,\nevolvability\, and the ability to self-replicate\, whi
 ch are unique for life. In contrast\, the chemists’ ability to\nbuild dy
 namically organized systems (e.g.\, chemical oscillators) is limited. Inte
 rconnections and feedback\nloops between different processes make them non
 -modular (holistic) and\, consequently\, hard to\nunderstand and rationall
 y construct. Nevertheless\, the ability to construct dynamically organized
  systems\nopens possibilities (i) to obtain materials with life-like prope
 rties and (ii) to probe the role of dynamic\nself-assembly in the origin o
 f Life.\nIn this talk\, I propose using the chemists’ ability to design 
 and synthesize molecules for the rational\nconstruction of dynamic systems
  and materials. I will illustrate this strategy with the rational design o
 f\nchemical oscillators\, waves\, patterns\, actuators\, and microstructur
 es. In perspective\, this work opens a\npath toward constructing life-like
  dynamic materials and observing emergent phenomena in prebiotically\nrele
 vant chemistry.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/6/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Max Notheis (University of Bonn)
DTSTART:20250211T150000Z
DTEND:20250211T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/7
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/7
 /">A light-driven metallo-supramolecular "claw-machine"</a>\nby Max Nothei
 s (University of Bonn) as part of Systems Chemistry Discussion Series\n\n\
 nAbstract\nThe incorporation of light-responsive moieties into ligand arch
 itectures allows for the synthesis of adaptive metal-organic cages. These 
 structures demonstrate potential for applications as molecular transporter
 s\, switchable catalysts\, and smart materials.[1] This work investigates 
 the potential of photo-responsive M2L3 helicates as a light-controlled ‘
 claw machine’ for selectively grabbing a metal ion. The structure self-a
 ssembles into a closed state with the diazocine photoswitch in its bent ci
 s ground state. Upon irradiation\, the photoswitch transitions into a meta
 stable and linear trans configuration\, inducing strain and weakening the 
 metal-ligand bonds. This metastable state exhibits a much faster exchange 
 rate in the metal replacement process. When the irradiation ceases\, therm
 al relaxation or irradiation with white light results in the structure rev
 erting to its original state. Like a claw machine\, the helicate offers sp
 atiotemporal control over the metal cation replacement process which is no
 t easily achieved using stimuli other than light.\n\n1. E. Benchimol\, J. 
 Tessarolo and G. H. Clever\, Nat. Chem.\, 2024\, 16\, 13–21.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/7/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Stephen Fielden (University of Birmingham)
DTSTART:20250304T150000Z
DTEND:20250304T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/8
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/8
 /">Systems Chemistry at the Nanoscale: Controlled fusion of polymer nanopa
 rticles</a>\nby Stephen Fielden (University of Birmingham) as part of Syst
 ems Chemistry Discussion Series\n\n\nAbstract\nParticle fusion is key for 
 combining the properties of multiple biological components. For example\, 
 cell fusion plays a crucial role in infection\, muscle formation and tissu
 e repair.1 The ability to direct analogous co-assembly between populations
  of synthetic nanoparticles also provides access to hybrid materials. Typi
 cally\, this relies on incorporating complementary recognition units onto 
 particle surfaces to thermodynamically favour co-assembly.2 Here I present
  a fundamentally different approach\, where kinetically controlled hetero-
 fusion occurs between two populations of unfunctionalised polymer nanopart
 icles.3\,4 Fusion extent can be tuned simply by adjusting polymer length. 
 We probed fusion using an elemental tag for cryogenic scanning transmissio
 n electron microscopy combined with electron energy loss spectroscopy (cry
 o-STEM-EELS). Our results demonstrate emergence of a complex process when 
 populations of synthetic nanoparticles are combined. We anticipate systems
 -level behaviour that results from such hetero-fusion will be fashioned as
  an elementary mechanism of synthetic communication that enables future te
 chnologies. \n\nReferences\n\n1. McNew\, J. A. et al. Compartmental specif
 icity of cellular membrane fusion encoded in SNARE proteins. Nature 407\, 
 153–159 (2000).\n\n2. Fan\, Y. et al. Co-assembly of Synthetic Particles
  with Heterogenous Components. Chem. Mater. 36\, 4011–4033 (2024).\n\n3.
  Fielden\, S. D. P.\, Derry\, M. J.\, Miller\, A. J.\, Topham\, P. D. & O'
 Reilly\, R. K. Triggered Polymersome Fusion. J. Am. Chem. Soc. 145\, 5824
 –5833 (2023).\n\n4. Fielden\, S. D. P. Kinetically Controlled and Nonequ
 ilibrium Assembly of Block Copolymers in Solution. J. Am. Chem. Soc. 146\,
  18781–18796 (2024).\n
LOCATION:https://researchseminars.org/talk/SysChemDis/8/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Karina Nakashima (University of Cambridge)
DTSTART:20250401T140000Z
DTEND:20250401T153000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/9
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/9
 /">Coacervates in a nucleic acid-peptide world – from complex mixtures t
 o functional protocells</a>\nby Karina Nakashima (University of Cambridge)
  as part of Systems Chemistry Discussion Series\n\n\nAbstract\nMixtures of
  oppositely charged polypeptides are known to undergo liquid-liquid phase 
 separation\, specifically through complex coacervation. Peptide/peptide co
 acervates support a “peptide-first” hypothesis for the origin of life\
 ; however\, with the rise of systems chemistry\, more heterogeneous scenar
 ios have gained traction. Recent studies suggest that nucleotides and amin
 o acids could have simultaneously formed and polymerized into short\, non-
 coded peptide\, DNA\, and RNA oligomers. In this talk\, I will demonstrate
  how a systems chemistry approach can help explain the emergence of functi
 onal protocells\, sharing our recent work on peptide/nucleic acid coacerva
 tes. Our findings suggest that even in the early stages of a nucleic acid-
 peptide world\, coacervate droplets likely formed. I will explore how incr
 eased compositional complexity—such as heteropolymers\, polydisperse mix
 tures\, and mismatched charge concentrations—affects droplet properties 
 like stability and viscosity. Supporting the idea that compositional diver
 sity is crucial for origin-of-life hypotheses\, I will show that coacervat
 es composed of mixed short DNA and RNA strands offer advantages over those
  composed of a single nucleic acid\, striking an optimal balance of stabil
 ity and viscosity to facilitate RNA primer extension.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/9/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Ryou Kubota (Kyushu University)
DTSTART:20250701T130000Z
DTEND:20250701T143000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/10
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 0/">Self-sorting and Dynamic Instability in Cell-inspired Multicomponent S
 upramolecular Hydrogels</a>\nby Ryou Kubota (Kyushu University) as part of
  Systems Chemistry Discussion Series\n\n\nAbstract\nCytoskeletons are comp
 osed of distinct supramolecular fibers made of proteins such as microtubul
 es and actin filaments. These fibers are self-sorted and dynamically under
 go assembly and disassembly with reversible noncovalent interactions in th
 e orthogonal manner\, enabling cells to maintain and modulate their mechan
 ical properties in response to external perturbations. Inspired by these e
 legant biological supramolecular systems\, we have achieved: (1) the const
 ruction of supramolecular double-network hydrogels through self-sorting of
  structurally distinct peptide- and lipid-type hydrogelators\, and (2) the
  realization of synthetic dynamic instability by hybridizing peptide-type 
 self-assembled fibers with surfactant micelles\, in which the supramolecul
 ar fibers exhibit autonomous cycles of growth and shrinkage during the tra
 nsient state prior to reaching thermodynamic equilibrium. In this presenta
 tion\, I will discuss recent progress in the development of such multi-com
 ponent and non-equilibrium supramolecular hydrogel systems.\n\n\nReference
 s:\n\nS. Torigoe\, K. Nagao\, R. Kubota*\, I. Hamachi*\, Emergence of dyna
 mic instability by hybridizing synthetic self-assembled dipeptide fibers w
 ith surfactant micelles. JACS 146\, 5799–5805 (2024).\n\nhttps://pubs.ac
 s.org/doi/10.1021/jacs.3c14565\n\n\nK. Nakamura\, W. Tanaka\, K. Sada\, R.
  Kubota\, T. Aoyama\, K. Urayama\, I. Hamachi*\, Phototriggered spatially 
 controlled out-of-equilibrium patterns of peptide nanofibers in a self-sor
 ting double network hydrogel. JACS 143\, 19532–19541 (2021).\n\nhttps://
 pubs.acs.org/doi/10.1021/jacs.1c09172\n\n\nH. Shigemitsu\, T. Fujisaku\, W
 . Tanaka\, R. Kubota\, S. Minami\, K. Urayama\, I. Hamachi\, An adaptive s
 upramolecular hydrogel comprising self-sorting double nanofibre networks. 
 Nat. Nanotechnol. 13\, 165–172 (2018).\n\nhttps://www.nature.com/article
 s/s41565-017-0026-6\n\n\nS. Onogi\, H. Shigemitsu\, T. Yoshii\, T. Tanida\
 , M. Ikeda\, R. Kubota\, I. Hamachi\, In situ real-time imaging of self-so
 rted supramolecular nanofibers. Nat. Chem. 8\, 743–752 (2016).\n\nhttps:
 //www.nature.com/articles/nchem.2526\n
LOCATION:https://researchseminars.org/talk/SysChemDis/10/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Francesco Avanzini (University of Padova)
DTSTART:20250506T140000Z
DTEND:20250506T153000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/11
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 1/">Nonideal Reaction-Diffusion Systems: Routes to Instability and Thermod
 ynamics</a>\nby Francesco Avanzini (University of Padova) as part of Syste
 ms Chemistry Discussion Series\n\n\nAbstract\nWe will present a framework 
 describing the dynamics and thermodynamics of open non-ideal reaction-diff
 usion systems\, which embodies Flory-Huggins' theories of mixtures and che
 mical reaction network theories. Our theory elucidates the mechanisms unde
 rpinning the emergence of self-organized dissipative structures in these s
 ystems. On the one hand\, it identifies the nature of the instabilities yi
 elding self-organization. On the other hand\, it also reveals the role of 
 the reaction network in powering and shaping these structures. This framew
 ork opens the way to investigating the energetic cost of phenomena such as
  liquid-liquid phase separation\, coacervation\, and the formation of biom
 olecular condensates.\n\nReferences\n\nPhys. Rev. Lett. 131 138301 (2023)\
 n\nJ. Chem. Phys. 161 174108 (2024)\n
LOCATION:https://researchseminars.org/talk/SysChemDis/11/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Benjamin M. W. Roberts\; Emanuele Penocchio (University of Padova\
 ; Northwestern University)
DTSTART:20250610T140000Z
DTEND:20250610T153000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/12
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 2/">An information ratchet improves selectivity in molecular recognition u
 nder nonequilibrium conditions: experiments and theory</a>\nby Benjamin M.
  W. Roberts\; Emanuele Penocchio (University of Padova\; Northwestern Univ
 ersity) as part of Systems Chemistry Discussion Series\n\n\nAbstract\nMole
 cular recognition is essential for controlling molecular-level processes\,
  passing molecular instructions for responses including structure formatio
 n\, signalling\, and replication. Usually\, the selectivity of molecular r
 ecognition is under thermodynamic control\, however\, where a higher fidel
 ity is required\, nature improves recognition selectivity by using an ener
 gy-dissipating kinetic-control regime in which error correction can be per
 formed. Although widespread in nature\, this approach has so far remained 
 largely unexplored in an abiotic context. Exploiting DNA hybridisation as 
 a model\, we show that an information ratchet mechanism increases selectiv
 ity for the ‘correct’ duplex from 2:1 at equilibrium to 6:1 under ener
 gy-dissipating conditions. Structural asymmetry in the DNA strands introdu
 ces kinetic asymmetry in the reaction network\, enabling enrichment under 
 nonequilibrium conditions without kinetic differentiation originating from
  complex bio-machinery. Furthermore\, error reduction based on relatively 
 minimalistic structures points a way toward solving Eigen’s paradox by s
 howing that complex structures are not necessary to increase molecular rec
 ognition fidelities above the thermodynamically expected values.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/12/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Patrick Hoffmann (University of Ulm)
DTSTART:20251202T150000Z
DTEND:20251202T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/13
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 3/">Autonomous Phosphodiester Reaction Cycles and Efficient Oxygen-Exchang
 e Methods in Phosphate Chemistry</a>\nby Patrick Hoffmann (University of U
 lm) as part of Systems Chemistry Discussion Series\n\n\nAbstract\nIn the f
 irst part of the talk\, I will present a reaction cycle based on the carbo
 diimide-driven formation of cyclic phosphodiesters and their selective rin
 g opening via cleavage of only one P–O bond. This inherent preference pr
 ovides the physical-organic basis for directional “walking” of a phosp
 hate group along two molecular tracks carrying alcohol footholds. I will a
 lso outline endergonic synthetic opportunities enabled by this mechanism. 
 Kinetic modelling clarifies the origin of kinetic selectivity\, the requir
 ements for autonomous walking\, and the system’s fuel efficiency.\n\nThe
  second part focuses on an applied systems-chemistry method for efficient 
 oxygen exchange on phosphate species. Together with my colleague Steffen\,
  we optimized this reaction and show that nucleotide phosphate groups can 
 be labelled with up to 96% efficiency\, while a second approach addresses 
 the challenge of achieving regioselective labelling on triphosphates.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/13/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Alexander Dack (Imperial College London)
DTSTART:20251104T150000Z
DTEND:20251104T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/14
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 4/">Recurrent neural chemical reaction networks that approximate arbitrary
  dynamics</a>\nby Alexander Dack (Imperial College London) as part of Syst
 ems Chemistry Discussion Series\n\n\nAbstract\nMany important phenomena in
  biochemistry and biology exploit dynamical features such as multi-stabili
 ty\, oscillations\, and chaos. Construction of novel chemical systems with
  such rich dynamics is a challenging problem central to the fields of synt
 hetic biology and molecular nanotechnology. In this work\, we address this
  problem by putting forward a molecular version of a recurrent artificial 
 neural network\, which we call the recurrent neural chemical reaction netw
 ork (RNCRN). The RNCRN uses a modular architecture - a network of chemical
  neurons - to approximate arbitrary dynamics.\n\nWe prove that with suffic
 iently many chemical neurons and suitably fast reactions\, the RNCRN can b
 e systematically trained to achieve any well-behaved dynamics. RNCRNs with
  relatively small number of chemical neurons and a moderate range of react
 ion rates are then trained on ordinary differential equations (ODEs) to di
 splay a variety of biologically-important dynamical features including osc
 illations\, robustness\, and bifurcations. We then introduce an algorithm 
 for producing designer dynamics without an underlying ODE model\, simply b
 y specifying desired dynamical features. We produce chemical reaction netw
 orks with irregular dynamic behaviours including a heart-shaped attractor\
 , disjoint attractors\, and a toroidal attractor.\n\nWe then train chemica
 l systems to toggle between two data-defined target dynamical behaviours (
 i.e. approximate a discrete-continuous hybrid system). We show that the sw
 itching behaviour of these hybrid systems can be trained to depend on non-
 linear conditions of upstream chemical parameters leading to abstract chem
 ical systems reminiscent of the regulatory framework found in life. Finall
 y\, we argue that small RNCRNs are experimentally implementable with DNA-s
 trand-displacement technologies and discuss implementation approaches more
  broadly in synthetic biology.\n\n[1] A. Dack\, B. Qureshi\, T. E. Ouldrid
 ge\, and T. Plesa\, “Recurrent neural chemical reaction networks that ap
 proximate arbitrary dynamics\,” 2024.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/14/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Keith Andrews (Durham University)
DTSTART:20250909T140000Z
DTEND:20250909T153000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/15
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 5/">Compartmentalising Catalysis</a>\nby Keith Andrews (Durham University)
  as part of Systems Chemistry Discussion Series\n\n\nAbstract\nKeith works
  at Durham University (https://www.durham.ac.uk/staff/keith-g-andrews). Hi
 s research in the fundamentals of catalysis lies on the peripheries of our
  usual systems chemistry discussion themes\, however\, given the central r
 ole of catalysis in driving nonequilibrium systems\, his talk should be of
  great interest. Keith applies principles from supramolecular chemistry to
  create enzyme mimics to address key questions: “Why are we so terrible 
 at catalysis compared to biology? What are we missing?”. He is moving to
 wards a more systems based approach to address some of the big problems th
 at he is tackling. Keith’s talk explores the fundamental principles of c
 atalysis\, touching on aspects of electric fields (JACS 2024\, ChemRxiv 20
 25)\, compartmentalisation (JACS 2025) and dynamics (BJOC 2025).\n
LOCATION:https://researchseminars.org/talk/SysChemDis/15/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Thomas Ouldridge (Imperial College London)
DTSTART:20251104T150000Z
DTEND:20251104T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/16
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 6/">The physical limits of molecular templating</a>\nby Thomas Ouldridge (
 Imperial College London) as part of Systems Chemistry Discussion Series\n\
 n\nAbstract\nThe systems of the biological cell achieve awesome and inspir
 ational feats of molecular assembly. A paradigmatic example is the selecti
 ve assembly of essentially arbitrary functional RNA and protein molecules 
 from only a small number of building blocks. This process is made possible
  by the copying of information from a DNA template sequence into the seque
 nce of daughter polymers (RNA and then proteins).\n\nTemplating is essenti
 al in creating biochemical complexity in living systems\, but it is almost
  entirely ignored in synthetic contexts. We argue that this oversight larg
 ely results from the fact that templating is necessarily an extraordinaril
 y far from equilibrium process\, making it hard to engineer. We also ask: 
 given that accurate templating results in a far from equilibrium system\, 
 how much chemical work must be put in to maintain such a state in an arbit
 rary system in which products are continuously produced and degraded? We f
 ind that the accuracy of the product ensemble  is upper bounded\, by a fun
 ction of ΔG\, the difference between the maximal and minimal free-energy 
 changes along pathways to product assembly. Remarkably\, however\, althoug
 h ΔG constrains the information propagated to the product distribution\, 
 the systems that saturate the bound do not look like their biological coun
 terparts\, instead operating in a pseudo-equilibrium fashion\, with produc
 tion and degradation for each product sequence largely occurring via the s
 ame pathway in forward and reverse directions\, rather than through the fr
 ee-energy consuming cycles observed in biology. Indeed\, the larger the cy
 clic flux observed in the system\, the worse the precision. This surprisin
 g result raises the question of why biology operates in the limit of large
  cyclic flux\, and also suggests a possible low-energy paradigm for molecu
 lar computation.\n\n[1] T. E. Ouldridge* and P. R. ten Wolde. Fundamental 
 costs in the production and destruction of persistent polymer copies. Phys
 . Rev. Lett. 118: 158103 (2017).\n\n[2] B. Qureshi\, J. M. Poulton and T. 
 E. Ouldridge*.Thermodynamic limits on general far-from-equilibrium molecul
 ar templating networks. In press at Newton\; preprint arXiv:2404.02791.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/16/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Jiarong Wu & Jake Greenfield (University of St Andrews)
DTSTART:20250113T150000Z
DTEND:20250113T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/17
DESCRIPTION:by Jiarong Wu & Jake Greenfield (University of St Andrews) as 
 part of Systems Chemistry Discussion Series\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/SysChemDis/17/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Dr Jake Greenfield (University of St Andrews)
DTSTART:20260203T150000Z
DTEND:20260203T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/18
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 8/">Using Photoswitchable Imines to Drive (dark)Transimination Reactions U
 phill</a>\nby Dr Jake Greenfield (University of St Andrews) as part of Sys
 tems Chemistry Discussion Series\n\n\nAbstract\nMolecules and materials co
 mprised of dynamic-covalent imine bonds display many desirable \npropertie
 s\, including stimuli-responsiveness\, recyclability\, and effortless prep
 aration\, among \nothers. However\, the E/Z photochromism of imines has of
 ten been overlooked due to \nhistorically poor performance compared to oth
 er photoswitches\, typically showing less than \n50% conversion to the met
 astable state and thermal half-lives of under one minute.1 Recently\, \nwe
  developed a strategy that significantly improves these photoswitching pro
 perties\, achieving \nquantitative E-to-Z conversion with visible light an
 d extending the thermal half-lives of the \nmetastable Z-state to over one
  day.2\,3 We further found that the regiochemistry of the C=N \nbond plays
  a significant role in the switching behavior.3\,4 Through a systematic in
 vestigation\, a \nset of design rules for this novel class of imine photos
 witch has now been reported\,5 along with \nthe first crystal structure of
  an arylimine in its metastable Z-conformation.4\nWith these improved phot
 oswitching properties\, we explored the light-dependent dynamiccovalent c
 hemistry of these photoswitches. To our surprise\, we found that they can 
 drive \ntransimination reactions energetically uphill when irradiated with
  light\,6 operating via a \nmechanism akin to a light-driven information r
 atchet.7 Moreover\, a non-photoresponsive \ntransimination could be driven
  out-of-equilibrium by coupling it to the photoresponsive \ntransimination
  reaction.8 This talk will provide an overview of our recent progress in t
 his area.9\nReferences\n\n(1) Greb\, L.\; Vantomme\, G.\; Lehn\, J-M. In M
 olecular Photoswitches\; Wiley\, 2022\; pp 325–349. \n\n(2) Wu\, J.\; Kr
 eimendahl\, L.\; Tao\, S.\; Anhalt\, O.\; Greenfield\, J. L. Chem. Sci. 20
 24\, 15 (11)\, 3872–3878.\n\n(3) Wu\, J.\; Li\, C.\; Kreimendahl\, L.\; 
 Greenfield\, J. L. Chem. Commun. 2024\, 60 (85)\, 12365–12368. \n\n(4) W
 u\, J.\; Kreimendahl\, L.\; Greenfield\, J. L. Angew. Chem. Int. Ed. 2025\
 , e202415464. \n\n(5) Wu\, J.\; Kreimendahl\, L.\; Greenfield\, J. L. J. A
 m. Chem. Soc. 2025\, jacs.5c02404.\n\n(6) Wu\, J.\; Greenfield\, J. L. J. 
 Am. Chem. Soc. 2024\, 146 (30)\, 20720–20727.\n\n(7) Serreli\, V.\; Lee\
 , C.-F.\; Kay\, E. R.\; Leigh\, D. A. Nature 2007\, 445 (7127)\, 523–527
 . \n\n(8) Wu\, J.\; Greenfield\, J. L. Chem 2025\, 102579. \n\n(9) Wu\, J.
 \; Greenfield\, J. L. Chem. Sci. 2025\, 16 (39)\, 17991–18004.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/18/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Héctor Soria Carrera
DTSTART:20260303T150000Z
DTEND:20260303T163000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/19
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/1
 9/">Genotype-Phenotype Coupling in Fuel-Dependent Synthetic Cells with an 
 Autocatalyst</a>\nby Héctor Soria Carrera as part of Systems Chemistry Di
 scussion Series\n\n\nAbstract\nThe central dogma of molecular biology desc
 ribes how a genotype influences a phenotype by transferring genetic inform
 ation from DNA to RNA to proteins\, thereby shaping the cell’s traits. R
 eciprocally\, the phenotype affects the success of the genotype by determi
 ning the organism’s ability to survive\, reproduce\, and thereby pass on
  its genetic material. This reciprocal genotype-phenotype relationship is 
 crucial for Darwinian evolution. Creating de novo life from scratch faces 
 the challenge of establishing a similar coupling between genotype and phen
 otype. This study uses fuel-dependent synthetic cells to explore genotype-
 phenotype coupling. We endowed these synthetic cells with a genotype in th
 e form of a replicator. The droplets selectively filter building blocks\, 
 decreasing the replication error rate. Reciprocally\, the replicator prolo
 ngs the droplet’s lifespan but only when produced in the droplets. Excit
 ingly\, under fuel-starvation conditions\, the prolonged lifetime results 
 in increased replicator fidelity. Thus\, we show the genotype helps the ph
 enotype\, which\, in the end\, helps the genotype again—genotype-phenoty
 pe coupling in a synthetic system. Future research aims to achieve autonom
 ous division of these compartments for generational transfer of the replic
 ator.\n\nReference\n\nH.Soria-Carrera\, L. Kauling and J. Boekhoven "Primi
 tive genotype-phenotype coupling in fuel-dependent synthetic cells with an
  autocatalyst"\, Chem \, 2026\, 12\, 102816.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/19/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Ghislaine Vantomme (TU Eindhoven)
DTSTART:20260407T140000Z
DTEND:20260407T153000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/20
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/2
 0/">From Responsive to Adaptive Supramolecular Materials”</a>\nby Ghisla
 ine Vantomme (TU Eindhoven) as part of Systems Chemistry Discussion Series
 \n\n\nAbstract\nSupramolecular chemistry provides powerful strategies to c
 onstruct materials whose properties are more than the sum of their molecul
 ar parts\, emerging from non-covalent interactions. In this lecture\, I wi
 ll show how molecular design and ordered supramolecular structures can be 
 used to translate molecular events into macroscopic function. Through sele
 cted examples from our work\, I will highlight systems that display stimul
 i-responsiveness\, and history-dependent behavior. I will also briefly pre
 sent our ongoing efforts to build a self-driving laboratory platform for c
 oatings\, integrating automation and data-driven optimization to accelerat
 e the discovery of supramolecular materials. These advances open new direc
 tions toward functional molecular systems with applications in biointerfac
 es\, (opto)electronics\, and sustainable materials.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/20/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Pushpita Ghosh (Indian Institute of Science Educaton and Research 
 Thriruvananthapuram)
DTSTART:20260512T130000Z
DTEND:20260512T143000Z
DTSTAMP:20260422T212705Z
UID:SysChemDis/21
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/SysChemDis/2
 1/">Minimal reaction-diffusion mechanism for spatiotemporal patterning in 
 fuel-driven supramolecular polymerization</a>\nby Pushpita Ghosh (Indian I
 nstitute of Science Educaton and Research Thriruvananthapuram) as part of 
 Systems Chemistry Discussion Series\n\n\nAbstract\nChemically fueled supra
 molecular systems provide a versatile platform for generating nonequilibri
 um structures and dynamics reminiscent of biological organization. In this
  talk I will discuss a minimal reaction–diffusion framework for a fuel-d
 riven supramolecular polymerization system that couples activation–deact
 ivation chemistry with cooperative assembly and fragmentation. The model c
 aptures autonomous oscillations arising from a Hopf bifurcation and shows 
 how temporal instabilities extend into spatial organization upon inclusion
  of diffusion. We demonstrate that the interplay between nonlinear reactio
 n kinetics and length-dependent transport gives rise to traveling polymeri
 zation fronts and complex spatiotemporal patterns. Importantly\, the model
  predicts accelerated wavefront propagation with super-diffusive scaling\,
  revealing a fundamentally nonequilibrium transport mechanism driven by re
 active feedback. These findings establish a minimal physical framework lin
 king dissipative self-assembly with active matter and provide design princ
 iples for programmable\, life-like supramolecular materials.\n\nReferences
 :\n\n1) Sharko\, A.\; Livitz\, D.\; De Piccoli\, S.\; Bishop\, K. J. M.\; 
 Hermans\, T. M\, “Insights into Chemically Fueled    Supramolecular Poly
 mers”\, Chemical Reviews 2022\, 122\, 11759-11777.\n\n2) Leira-Iglesias\
 , J.\; Tassoni\, A.\; Adachi\, T.\; Stich\, M.\; Hermans\, T. M. Oscillati
 ons\, travelling fronts and patterns in a supramolecular system. Nature Na
 notechnology 2018\, 13\, 1021–1027.\n
LOCATION:https://researchseminars.org/talk/SysChemDis/21/
END:VEVENT
END:VCALENDAR
