BEGIN:VCALENDAR
VERSION:2.0
PRODID:researchseminars.org
CALSCALE:GREGORIAN
X-WR-CALNAME:researchseminars.org
BEGIN:VEVENT
SUMMARY:Lexing Ying (Stanford University)
DTSTART:20200408T231000Z
DTEND:20200409T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/1
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/1/">Solving inverse problems with deep learning</a>\nby Lexing Ying (S
 tanford University) as part of Berkeley applied mathematics seminar\n\n\nA
 bstract\nThis talk is about some recent progress on solving inverse proble
 ms using deep learning. Compared to traditional machine learning problems\
 , inverse problems are often limited by the size of the training data set.
  We show how to overcome this issue by incorporating mathematical analysis
  and physics into the design of neural network architectures. We first des
 cribe neural network representations of pseudodifferential operators and F
 ourier integral operators. We then continue to discuss applications includ
 ing electric impedance tomography\, optical tomography\, inverse acoustic/
 EM scattering\, and travel-time tomography.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/1/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Michael Mahoney (UC Berkeley)
DTSTART:20200422T231000Z
DTEND:20200423T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/2
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/2/">Determinantal point processes and randomized numerical linear alge
 bra</a>\nby Michael Mahoney (UC Berkeley) as part of Berkeley applied math
 ematics seminar\n\n\nAbstract\nRandomized Numerical Linear Algebra (RandNL
 A) is an area which uses randomness\, most notably random sampling and ran
 dom projection methods\, to develop improved algorithms for ubiquitous mat
 rix problems\, such as those that arise in scientific computing\, data sci
 ence\, machine learning\, etc. A seemingly different topic\, but one which
  has a long history in pure and applied mathematics\, is that of Determina
 ntal Point Processes (DPPs)\, which are stochastic point processes\, the p
 robability distribution of which is characterized by sub-determinants of s
 ome matrix. Recent work has uncovered deep and fruitful connections betwee
 n DPPs and RandNLA. For example\, random sampling with a DPP leads to new 
 kinds of unbiased estimators for classical RandNLA tasks\, enabling more r
 efined statistical and inferential understanding of RandNLA algorithms\; a
  DPP is\, in some sense\, an optimal randomized method for many RandNLA pr
 oblems\; and a standard RandNLA technique\, called leverage score sampling
 \, can be derived as the marginal distribution of a DPP. This work will be
  reviewed\, as will recent algorithmic developments\, illustrating that\, 
 while not quite as efficient as simply applying a random projection\, thes
 e DPP-based algorithms are only moderately more expensive. Joint work with
  Michal Derezinski.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/2/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Ken Kamrin (MIT)
DTSTART:20200429T231000Z
DTEND:20200430T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/3
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/3/">Toward reduced-order models for flowing grains: Surprising complex
 ity meets surprising simplicity</a>\nby Ken Kamrin (MIT) as part of Berkel
 ey applied mathematics seminar\n\n\nAbstract\nDespite the commonality of g
 ranular materials in day-to-day life\, modeling systems of millions or mor
 e flowing particles has proven historically difficult. This has direct rea
 l-world ramifications owing to the prominent role granular media play in m
 ultiple industries and in terrain dynamics. One can attempt to track every
  grain with discrete particle methods\, but realistic systems are often to
 o large for this approach and a continuum model is desired. However\, gran
 ular media display unusual behaviors that complicate the continuum treatme
 nt: they can behave like solid\, flow like liquid\, or separate into a “
 gas”\, and the rheology of the flowing state displays remarkable subtlet
 ies.\n\nTo address these challenges\, in this talk we develop a family of 
 continuum models and solvers\, permitting quantitative modeling capabiliti
 es. We discuss a variety of applications\, ranging from general problems t
 o specific techniques for problems of intrusion\, impact\, driving\, and l
 ocomotion in granular media. To calculate flows in general cases\, a rathe
 r significant nonlocal effect is evident\, which is well-described with ou
 r recent nonlocal model accounting for grain cooperativity within the flow
  rule. On the other hand\, to model only intrusion forces on submerged obj
 ects\, we will show\, and explain why\, many of the experimentally observe
 d results can be captured from a much simpler tension-free frictional plas
 ticity model. This approach gives way to some surprisingly simple general 
 tools\, including the granular Resistive Force Theory\, and a broad set of
  scaling laws inherent to the problem of granular locomotion. These scalin
 gs are validated directly and suggest a new down-scaled paradigm for granu
 lar locomotive design\, on earth and beyond\, to be used much like scaling
  laws in fluid mechanics.\n\nWe close with a brief discussion of ongoing m
 odeling efforts for wet granular systems\, including those with non-trivia
 l grain-grain interactions and those with highly deformable particles.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/3/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Tamara Kolda (Sandia National Laboratory)
DTSTART:20200506T231000Z
DTEND:20200507T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/4
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/4/">Practical leverage-based sampling for low-rank tensor decompositio
 n</a>\nby Tamara Kolda (Sandia National Laboratory) as part of Berkeley ap
 plied mathematics seminar\n\n\nAbstract\nConventional algorithms for findi
 ng low-rank canonical polyadic (CP) tensor decompositions are unwieldy for
  large sparse tensors. The CP decomposition can be computed by solving a s
 equence of overdetermined least problems with special Khatri-Rao structure
 . In this work\, we present an application of randomized algorithms to fit
 ting the CP decomposition of sparse tensors\, solving a significantly smal
 ler sampled least squares problem at each iteration with probabilistic gua
 rantees on the approximation errors. Prior work has shown that sketching i
 s effective in the dense case\, but the prior approach cannot be applied t
 o the sparse case because a fast Johnson-Lindenstrauss transform (e.g.\, u
 sing a fast Fourier transform) must be applied in each mode\, causing the 
 sparse tensor to become dense. Instead\, we perform sketching through leve
 rage score sampling\, crucially relying on the fact that the structure of 
 the Khatri-Rao product allows sampling from overestimates of the leverage 
 scores without forming the full product or the corresponding probabilities
 . Naïve application of leverage score sampling is infective because we of
 ten have cases where a few scores are quite large\, so we propose a novel 
 hybrid of deterministic and random leverage-score sampling which is more e
 fficient and effective. Numerical results on real-world large-scale tensor
 s show the method is faster than competing methods without sacrificing acc
 uracy. This is joint work with Brett Larsen at Stanford University.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/4/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Linfeng Zhang (Princeton University)
DTSTART:20200513T231000Z
DTEND:20200514T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/5
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/5/">Symmetry preserving neural network models for molecular modelling<
 /a>\nby Linfeng Zhang (Princeton University) as part of Berkeley applied m
 athematics seminar\n\n\nAbstract\nWe discuss how to leverage the fitting a
 bility of neural networks to accurately and efficiently represent two type
 s of maps in molecular modelling problems. The first type takes as input t
 he coordinates of atoms and their associated chemical species\, and output
 s physical observables such as the interatomic potential energy (a scalar)
 \, the electric polarization (a vector) and polarizability (a tensor)\, an
 d the charge density (a field). The second type\, like post–Hartree–Fo
 ck methods\, uses the ground-state electronic orbitals as the input\, and 
 predicts the energy difference between results of highly accurate models s
 uch as the coupled-cluster method and low accuracy models such as the Hart
 ree-Fock (HF) method. Special attentions are paid to how the neural networ
 k models take care of physical properties like symmetry and locality\, so 
 that models trained with small-size systems can be transferred to differen
 t and large-size ones\; and how they are made end-to-end\, so that little 
 human intervention is required for various complex tasks. This is joint wo
 rk with Yixiao Chen\, Han Wang\, and Weinan E.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/5/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yanhe Huang (UC Berkeley)
DTSTART:20200818T231000Z
DTEND:20200819T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/6
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/6/">Axisymmetric bubbles rising in 3D and a new accurate algorithm for
  evaluating orthogonal polynomials</a>\nby Yanhe Huang (UC Berkeley) as pa
 rt of Berkeley applied mathematics seminar\n\n\nAbstract\nn the high Reyno
 lds number regime\, under what conditions do there exist steadily rising b
 ubbles? This question has been studied extensively both experimentally and
  numerically\, but current mathematical models and numerical discretizatio
 ns suffer from large numerical errors that make the results less convincin
 g. In the first part of this talk\, we build an inviscid model for the ste
 ady rising problem and find different solution branches of bubble shapes c
 haracterized by the number of humps. These only exist when there is no gra
 vity. When there is gravity\, viscous potential flow is used to find diffe
 rent steady shapes. The corresponding dynamic problem is also studied. Tec
 hniques such as axisymmetric potential theory\, Hou-Lowengrub-Shelley fram
 ework\, and weak/hyper-singularity removal are applied to guarantee spectr
 al accuracy.\n\nDue to the importance of accurate evaluation of orthogonal
  polynomials in the boundary integral method used in the first part\, in t
 he second part of the talk I will introduce a new way to evaluate orthogon
 al polynomials more accurately near the endpoints of the integration inter
 val. An associated family of orthogonal polynomials is evaluated at interi
 or points to determine the values of the original polynomials near endpoin
 ts. The new method can achieve round-off error accuracy even for end-point
  evaluation of generic high-degree Jacobi polynomials and generalized Lagu
 erre polynomials. More accurate quadrature abscissas and weights can be ac
 hieved accordingly.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/6/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Stefan Steinerberger (University of Washington)
DTSTART:20200826T231000Z
DTEND:20200827T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/7
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/7/">Solving Linear Systems of Equations via Randomized Kaczmarz/Stocha
 stic Gradient Descent</a>\nby Stefan Steinerberger (University of Washingt
 on) as part of Berkeley applied mathematics seminar\n\n\nAbstract\nThe Ran
 domized Kaczmarz method is a classical iterative method to solve linear sy
 stems: the solution of a system Ax = b is simply the point of intersection
  of several hyperplanes. The Kaczmarz method (also known as the Projection
  Onto Convex Sets Method) proceeds by simply starting with a point and the
 n iteratively projecting it on these hyperplanes. If the hyperplanes (=row
 s of the matrix) are picked in random order\, the algorithm was analyzed b
 y Strohmer & Vershynin and has linear convergence. We show that the method
 \, as a byproduct\, also computes small singular vectors and\, in fact\, t
 he iterates tend to approach the true solution from the direction of the s
 mallest singular vector in a meta-stable way. This also explains why the a
 lgorithm has such wonderful regularization properties. The arguments are a
 ll fairly self-contained\, elementary and nicely geometric. This gives a p
 retty clear picture – the question is: can this picture be used to impro
 ve the method?\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/7/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Chao Ma (Stanford University)
DTSTART:20200902T231000Z
DTEND:20200903T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/8
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/8/">The Slow Deterioration of the Generalization Error of the Random F
 eature Model</a>\nby Chao Ma (Stanford University) as part of Berkeley app
 lied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/8/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Weile Jia (UC Berkeley)
DTSTART:20200909T231000Z
DTEND:20200910T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/9
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/9/">HPC+AI: pushing ab initio MD to 100 million atoms on the Summit su
 percomputer</a>\nby Weile Jia (UC Berkeley) as part of Berkeley applied ma
 thematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/9/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Alex Townsend (Cornell University)
DTSTART:20200916T231000Z
DTEND:20200917T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/10
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/10/">The ultraspherical spectral method</a>\nby Alex Townsend (Cornell
  University) as part of Berkeley applied mathematics seminar\n\n\nAbstract
 \nPseudospectral methods\, based on high degree polynomials\, have spectra
 l accuracy when solving differential equations but typically lead to dense
  and ill-conditioned matrices. The ultraspherical spectral method is a num
 erical technique to solve ordinary and partial differential equations\, le
 ading to almost banded well-conditioned linear systems while maintaining s
 pectral accuracy. In this talk\, we introduce the ultraspherical spectral 
 method and develop it into a spectral element method using a modification 
 to a hierarchical Poincare-Steklov domain decomposition method.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/10/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Martina Bukac (University of Notre Dame)
DTSTART:20200923T231000Z
DTEND:20200924T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/11
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/11/">A computational framework for fluid-structure interaction problem
 s</a>\nby Martina Bukac (University of Notre Dame) as part of Berkeley app
 lied mathematics seminar\n\n\nAbstract\nFluid-structure interaction (FSI) 
 problems arise in many applications\, such as aerodynamics\, geomechanics 
 and hemodynamics. They are moving domain\, multiphysics problems character
 ized by nonlinear coupling between a fluid and structure. As a result\, FS
 I problems are challenging to numerically solve and analyze. A popular app
 roach is to solve the fluid and structure sub-problems in a partitioned ma
 nner\, allowing the use of solvers specifically designed for the physics o
 f each subproblem. However\, stability issues often arise as a result of F
 SI coupling unless the design and implementation of a partitioned scheme i
 s carefully developed. We will present a family of partitioned numerical s
 chemes for the interaction between an incompressible\, viscous fluid and a
 n elastic structure. We will consider cases where the structure is thick\,
  i.e.\, described using the same number of spatial dimensions as the fluid
 \, and when the structure is thin\, i.e.\, described using a lower-dimensi
 onal model. We will present stability and convergence results\, as well as
  numerical examples where the presented methods are compared to other meth
 ods in the literature.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/11/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Andrew Childs (University of Maryland)
DTSTART:20200930T231000Z
DTEND:20201001T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/12
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/12/">Symmetries\, graph properties\, and quantum speedups</a>\nby Andr
 ew Childs (University of Maryland) as part of Berkeley applied mathematics
  seminar\n\n\nAbstract\nAaronson and Ambainis (2009) and Chailloux (2018) 
 showed that fully symmetric (partial) functions do not admit exponential q
 uantum query speedups. This raises a natural question: how symmetric must 
 a function be before it cannot exhibit a large quantum speedup?\n\nIn this
  work\, we prove that hypergraph symmetries in the adjacency matrix model 
 allow at most a polynomial separation between randomized and quantum query
  complexities. We also show that\, remarkably\, permutation groups constru
 cted out of these symmetries are essentially the only permutation groups t
 hat prevent super-polynomial quantum speedups. We prove this by fully char
 acterizing the primitive permutation groups that allow super-polynomial qu
 antum speedups.\n\nIn contrast\, in the adjacency list model for bounded-d
 egree graphs (where graph symmetry is manifested differently)\, we exhibit
  a property testing problem that shows an exponential quantum speedup. The
 se results resolve open questions posed by Ambainis\, Childs\, and Liu (20
 10) and Montanaro and de Wolf (2013).\n\nThis is joint work with Shalev Be
 n-David\, András Gilyén\, William Kretschmer\, Supartha Podder\, and Dao
 chen Wang. https://arxiv.org/abs/2006.12760\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/12/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Franziska Weber (Carnegie Mellon University)
DTSTART:20201014T231000Z
DTEND:20201015T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/13
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/13/">Numerical approximation of statistical solutions of hyperbolic sy
 stems of conservation laws</a>\nby Franziska Weber (Carnegie Mellon Univer
 sity) as part of Berkeley applied mathematics seminar\n\n\nAbstract\nStati
 stical solutions are time-parameterized probability measures on spaces of 
 integrable functions\, which have been proposed recently as a framework fo
 r global solutions for multi-dimensional hyperbolic systems of conservatio
 n laws. We develop a numerical algorithm to approximate statistical soluti
 ons of conservation laws and show that under the assumption of ‘weak sta
 tistical scaling’\, which is inspired by Kolmogorov’s 1941 turbulence 
 theory\, the approximations converge in an appropriate topology to statist
 ical solutions. Numerical experiments confirm that the assumption might ho
 ld true.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/13/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Rolando Somma (Los Alamos National Laboratory)
DTSTART:20201021T231000Z
DTEND:20201022T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/14
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/14/">Quantum linear systems problem: solution and verification</a>\nby
  Rolando Somma (Los Alamos National Laboratory) as part of Berkeley applie
 d mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/14/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Dong An (UC Berkeley)
DTSTART:20201028T231000Z
DTEND:20201029T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/15
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/15/">Quantum adiabatic evolution and applications in computational phy
 sics and quantum computing</a>\nby Dong An (UC Berkeley) as part of Berkel
 ey applied mathematics seminar\n\n\nAbstract\nOriginally discovered by Bor
 n and Fock (1928)\, a quantum mechanical system almost remains in its inst
 antaneous eigenstates if the Hamiltonian varies sufficiently slowly and th
 ere is a gap between the eigenvalue and the rest of the Hamiltonian’s sp
 ectrum. Such a system is said to be a quantum adiabatic evolution\, and ha
 s become a powerful tool for analyzing quantum dynamics and designing fast
  classical and quantum algorithms. In this talk\, I will first discuss the
  mathematical formulation of quantum adiabatic evolutions\, namely quantum
  adiabatic theorem. Several versions of the theorem will be discussed\, wi
 th a focus on the factors that might significantly influence the adiabatic
 ity. Then I will present two applications of the adiabatic evolutions and 
 adiabatic theorems. One is accelerating numerical simulation of Schrodinge
 r equations on classical computers\, and the other is a quantum algorithm 
 for solving linear system of equations with near optimal complexity on a q
 uantum computer.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/15/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Xiaochuan Tian (UCSD)
DTSTART:20201105T001000Z
DTEND:20201105T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/16
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/16/">Reproducing kernel collocation methods for nonlocal models: asymp
 totic compatibility and numerical stability</a>\nby Xiaochuan Tian (UCSD) 
 as part of Berkeley applied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/16/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Jiequn Han (Princeton University)
DTSTART:20201112T001000Z
DTEND:20201112T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/17
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/17/">Solving High-Dimensional PDEs\, Controls\, and Games with Deep Le
 arning</a>\nby Jiequn Han (Princeton University) as part of Berkeley appli
 ed mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/17/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Robert Webber (Courant Institute)
DTSTART:20201203T001000Z
DTEND:20201203T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/18
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/18/">Monte Carlo methods for the Hermitian eigenvalue problem</a>\nby 
 Robert Webber (Courant Institute) as part of Berkeley applied mathematics 
 seminar\n\n\nAbstract\nIn quantum mechanics and the analysis of Markov pro
 cesses\, Monte Carlo methods are needed to identify low-lying eigenfunctio
 ns of dynamical generators. The standard Monte Carlo approaches for identi
 fying eigenfunctions\, however\, can be inaccurate or slow to converge. Wh
 at limits the efficiency of the currently available spectral estimation me
 thods\, and what is needed to build more efficient methods for the future?
  Through numerical analysis and computational examples\, we begin to answe
 r these questions. We present the first-ever convergence proof and error b
 ounds for the variational approach to conformational dynamics (VAC)\, the 
 dominant method for estimating eigenfunctions used in biochemistry. Additi
 onally\, we analyze and optimize variational Monte Carlo (VMC)\, which com
 bines Monte Carlo with neural networks to accurately identify low-lying ei
 genstates of quantum systems.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/18/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Aditi Krishnapriyan (Lawrence Berkeley National Lab)
DTSTART:20201007T231000Z
DTEND:20201008T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/19
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/19/">Persistent Homology Advances Interpretable Machine Learning for S
 cientific Applications</a>\nby Aditi Krishnapriyan (Lawrence Berkeley Nati
 onal Lab) as part of Berkeley applied mathematics seminar\n\n\nAbstract\nM
 achine learning for scientific applications\, ranging from physics and mat
 erials science to biology\, has emerged as a promising alternative to more
  time-consuming experiments and simulations. The challenge with this appro
 ach is the selection of features that enable universal and interpretable s
 ystem representations across multiple prediction tasks. We use persistent 
 homology to construct holistic feature representations to describe the str
 ucture of scientific systems\; for example\, material and protein structur
 es. We show that these representations can also be augmented with other ge
 neric features to capture further information. We demonstrate our approach
 es on multiple scientific datasets by predicting a variety of different ta
 rgets across different conditions. Our results show considerable improveme
 nt in both accuracy and transferability across targets compared to models 
 constructed from commonly used manually curated features. A key advantage 
 of our approach is interpretability. For example\, in material structures\
 , our persistent homology features allow us to identify the location and s
 ize of pores in the structure that correlate best to different materials p
 roperties\, contributing to understanding atomic level structure-property 
 relationships for materials design.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/19/
END:VEVENT
BEGIN:VEVENT
SUMMARY:James Stokes (Flatiron Institute)
DTSTART:20201119T001000Z
DTEND:20201119T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/20
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/20/">First-quantized neural networks for lattice fermions</a>\nby Jame
 s Stokes (Flatiron Institute) as part of Berkeley applied mathematics semi
 nar\n\n\nAbstract\nFirst-quantized deep neural network techniques are deve
 loped for analyzing strongly coupled fermionic systems on the lattice. Usi
 ng a Slater-Jastrow inspired ansatz which exploits deep residual networks 
 with convolutional residual blocks\, we approximately determine the ground
  state of spinless fermions on a square lattice with nearest-neighbor inte
 ractions. The flexibility of the neural-network ansatz results in a high l
 evel of accuracy when compared to exact diagonalization results on small s
 ystems\, both for energy and correlation functions. On large systems\, we 
 obtain accurate estimates of the boundaries between metallic and charge or
 dered phases as a function of the interaction strength and the particle de
 nsity.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/20/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Dongbin Xiu (The Ohio State University)
DTSTART:20210211T001000Z
DTEND:20210211T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/21
DESCRIPTION:by Dongbin Xiu (The Ohio State University) as part of Berkeley
  applied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/21/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Seung-Yeal Ha (Seoul National University)
DTSTART:20210428T231000Z
DTEND:20210429T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/23
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/23/">Emergent behaviors of Lohe tensor flocks</a>\nby Seung-Yeal Ha (S
 eoul National University) as part of Berkeley applied mathematics seminar\
 n\n\nAbstract\nIn this talk\, we present a new aggregation model on the sp
 ace of rank-m tensors with the same size\, and study emergent dynamics of 
 the proposed model. Our proposed aggregation model is general enough to in
 clude Lohe type synchronization models such as the Kuramoto model\, the Lo
 he sphere model and the Lohe matrix models for the ensemble of real rank-0
 \, rank-1 and rank-2 tensors\, respectively. In this regard\, we call our 
 proposed model as the Lohe tensor model for rank-m tensors with the same s
 ize. For the proposed model\, we present several sufficient frameworks lea
 ding to the collective dynamics of the Lohe tensor model in terms of syste
 m parameters and initial data\, and study existence of special solutions s
 uch as completely separable solutions and quadratically separable solution
 s.  This is a joint work with Hansol Park (Seoul National Univ.) and Dohyu
 n Kim (Sungshin Women’s Univ.)\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/23/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Jianfeng Lu (Duke University)
DTSTART:20210204T001000Z
DTEND:20210204T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/24
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/24/">Towards solving high dimensional PDEs using neural networks</a>\n
 by Jianfeng Lu (Duke University) as part of Berkeley applied mathematics s
 eminar\n\n\nAbstract\nNumerical solution to high dimensional PDEs has been
  one of the central challenges in scientific computing due to curse of dim
 ension. In recent years\, we have seen tremendous progress in applying neu
 ral networks to solve high dimensional PDEs\, while the analysis for such 
 methods is still lacking. In this talk\, we will discuss some of these num
 erical methods for high dimensional PDEs and also some initial attempts in
  numerical analysis for high dimensional PDEs.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/24/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Doron Levy (University of Maryland)
DTSTART:20210304T001000Z
DTEND:20210304T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/25
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/25/">Fighting drug resistance with math</a>\nby Doron Levy (University
  of Maryland) as part of Berkeley applied mathematics seminar\n\n\nAbstrac
 t\nThe emergence of drug-resistance is a major challenge in chemotherapy. 
 In this talk we will overview some of our recent mathematical models for d
 escribing the dynamics of drug-resistance in solid tumors. These models fo
 llow the dynamics of the tumor\, assuming that the cancer cell population 
 depends on a phenotype variable that corresponds to the resistance level t
 o a cytotoxic drug.  Under certain conditions\, our models predict that mu
 ltiple resistant traits emerge at different locations within the tumor\, c
 orresponding to heterogeneous tumors. We show that a higher drug dosage ma
 y delay a relapse\, yet\, when this happens\, a more resistant trait emerg
 es. We will show how mathematics can be used to propose an efficient drug 
 schedule aiming at minimizing the growth rate of the most resistant trait\
 , and how such resistant cells can be eliminated.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/25/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Ruiwen Shu (University of Maryland\, College Park)
DTSTART:20210128T001000Z
DTEND:20210128T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/26
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/26/">Linear interpolation convexity/concavity in the minimization of a
 ttractive-repulsive energy</a>\nby Ruiwen Shu (University of Maryland\, Co
 llege Park) as part of Berkeley applied mathematics seminar\n\n\nAbstract\
 nEnergy minimization problems of attractive-repulsive pairwise interaction
 s are very important in the study of pattern formation in biological and s
 ocial sciences. In this talk\, I will discuss some recent progress (joint 
 work with Jose Carrillo) on the study of Wasserstein-$\\infty$ local energ
 y minimizers by using the method of linear interpolation convexity/concavi
 ty. In the first part\, we prove the radial symmetry and uniqueness of loc
 al minimizers for interaction potentials satisfying the 'linear interpolat
 ion convexity'\, which generalizes the result of O. Lopes 17' for global m
 inimizers. In the second part\, we show that the failure of linear interpo
 lation convexity could lead to the formation of small scales in the suppor
 t of local minimizers\, and construct interaction potentials whose local m
 inimizers are supported on fractal sets. To our best knowledge\, this is t
 he first time people observe fractal sets as the support of local minimize
 rs.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/26/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Mitchell Luskin (University of Minnesota)
DTSTART:20210331T231000Z
DTEND:20210401T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/27
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/27/">Mathematics and Physics at the Moiré Scale</a>\nby Mitchell Lusk
 in (University of Minnesota) as part of Berkeley applied mathematics semin
 ar\n\n\nAbstract\nPlacing a two-dimensional lattice on another with a smal
 l rotation gives rise to periodic “moire” patterns on a superlattice s
 cale much larger than the original lattice. This effective large-scale fun
 damental domain allows phenomena such as the fractal Hofstadter butterfly 
 in the spectrum of Harper’s equation to be observed in real crystals. Ex
 perimentalists have more recently observed new correlated phases at the 
 “magic” twist angles predicted by theorists. \n\nWe will give mathemat
 ical and computational models to predict and gain insight into new physica
 l phenomena at the moiré scale including our recent mathematical and expe
 rimental results for twisted trilayer graphene.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/27/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Andrew Horning (Cornell University)
DTSTART:20210121T001000Z
DTEND:20210121T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/28
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/28/">Computing spectral properties of infinite-dimensional operators</
 a>\nby Andrew Horning (Cornell University) as part of Berkeley applied mat
 hematics seminar\n\n\nAbstract\nComputing the spectrum of a differential o
 r integral operator is usually done in two steps: (1) discretize the opera
 tor to obtain a matrix eigenvalue problem and (2) compute eigenvalues of t
 he matrix with numerical linear algebra. This “discretize-then-solve” 
 paradigm is flexible and powerful\, but tension between spectral propertie
 s of the operator and the matrix discretizations can lead to numerical art
 ifacts that pollute computed spectra and degrade accuracy. Moreover\, it i
 s unclear how to robustly capture infinite-dimensional phenomena\, like co
 ntinuous spectra\, with “discretize-then-solve.” In this talk\, we int
 roduce a new computational framework that extracts discrete and continuous
  spectral properties of a broad class of operators by strategically sampli
 ng the resolvent operator in the complex plane. The resulting algorithms r
 espect key structure from the operator\, regardless of the underlying matr
 ix discretizations used for computation. We illustrate the approach throug
 h a range of examples\, including a Dirac operator and a magnetic tight-bi
 nding model of graphene.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/28/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Zhewei Yao (University of California\, Berkeley)
DTSTART:20210218T001000Z
DTEND:20210218T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/29
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/29/">Second Order Methods for Neural Network Analysis\, Training\, and
  Inference</a>\nby Zhewei Yao (University of California\, Berkeley) as par
 t of Berkeley applied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/29/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Zhenning Cai (National University of Singapore)
DTSTART:20210225T001000Z
DTEND:20210225T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/30
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/30/">On the method of complex Langevin</a>\nby Zhenning Cai (National 
 University of Singapore) as part of Berkeley applied mathematics seminar\n
 \n\nAbstract\nThe complex Langevin (CL) method is a numerical approach to 
 alleviate the numerical sign problem in the computation of path integrals 
 in lattice field theories. Mathematically\, it is a simple numerical tool 
 to compute a wide class of high-dimensional and oscillatory integrals with
  the form of an ensemble average. The method was developed in 1980s. Howev
 er\, after it was proposed\, it had very few applications due to its subtl
 e nature. It is often observed that the CL method converges but the limiti
 ng result is incorrect. Less than one decade ago\, the CL method was impro
 ved by gauge cooling method and dynamical stabilization\, after which the 
 CL method acquired much more attention and was later successfully applied 
 to a number of fields including finite density quantum chromodynamics\, su
 perstring theory\, and the spin-orbit coupling. In this talk\, I will take
  the mathematical perspective to explain the basic idea of the CL method a
 nd the reason of its failure. The current limitation of the method and the
  possible remedies will also be discussed.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/30/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Fernando Casas (Universitat Jaume I\, Spain)
DTSTART:20210311T001000Z
DTEND:20210311T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/31
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/31/">Symmetric-conjugate composition methods in the numerical integrat
 ion of differential equations</a>\nby Fernando Casas (Universitat Jaume I\
 , Spain) as part of Berkeley applied mathematics seminar\n\n\nAbstract\nIn
  this talk I will analyze composition methods with complex coefficients ex
 hibiting the so-called “symmetry-conjugate” pattern in their distribut
 ion. In particular\, I will study their behavior with respect to preservat
 ion of qualitative properties when projected on the real axis and how they
  compare with the usual left-right palindromic compositions. New schemes w
 ithin this family up to order 8 will be proposed and illustrated on severa
 l examples. Some of the special features of this class of methods will als
 o be reviewed.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/31/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yuan Su (Caltech)
DTSTART:20210319T171000Z
DTEND:20210319T180000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/32
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/32/">Nearly tight Trotterization of interacting electrons</a>\nby Yuan
  Su (Caltech) as part of Berkeley applied mathematics seminar\n\n\nAbstrac
 t\nWe consider simulating quantum systems on digital quantum computers. We
  show that the performance of quantum simulation can be improved by simult
 aneously exploiting the commutativity of Hamiltonian\, the sparsity of int
 eractions\, and the prior knowledge of initial state. We achieve this usin
 g Trotterization for a class of interacting electrons that encompasses var
 ious physical systems\, including the plane-wave-basis electronic structur
 e and the Fermi-Hubbard model. We estimate the simulation error by taking 
 the transition amplitude of nested commutators of Hamiltonian terms within
  the $\\eta$-electron manifold. We develop multiple techniques for boundin
 g the transition amplitude and expectation of general fermionic operators\
 , which may be of independent interest. We show that it suffices to use $\
 \left(\\frac{n^{5/3}}{\\eta^{2/3}}+n^{4/3}\\eta^{2/3}\\right)n^{o(1)}$ gat
 es to simulate electronic structure in the plane-wave basis with $n$ spin 
 orbitals and $\\eta$ electrons\, improving the best previous result in sec
 ond quantization while outperforming the first-quantized simulation when $
 n=\\eta^{2-o(1)}$. We also obtain an improvement for simulating the Fermi-
 Hubbard model. We construct concrete examples for which our bounds are alm
 ost saturated\, giving a nearly tight Trotterization of interacting electr
 ons.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/32/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Jimmy Xia (University of California\, Berkeley)
DTSTART:20210407T231000Z
DTEND:20210408T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/33
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/33/">Mathematical modeling of human learning and decision making</a>\n
 by Jimmy Xia (University of California\, Berkeley) as part of Berkeley app
 lied mathematics seminar\n\n\nAbstract\nReinforcement learning (RL) has be
 en widely used to study and model human\, animal and artificial intelligen
 ce. In this talk\, we focus on modeling human learning and decision making
 \, and exemplify two ways that mathematical RL modeling adds to our existi
 ng knowledge of human cognition: (1) as a powerful quantitative tool for p
 arametrizing and compressing individual differences in human behavior\, an
 d (2) as an important theoretical framework for complex human cognition. I
 n the first study\, we use RL modeling to capture trial-by-trial learning 
 dynamics in a probabilistic task and to understand how learning changes du
 ring puberty. In the second study\, we augment existing RL models to expla
 in transfer and generalization effects in multi-step learning and decision
  making tasks.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/33/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Zhennan Zhou (Peking University)
DTSTART:20210414T231000Z
DTEND:20210415T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/34
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/34/">Efficient Sampling of Thermal Averages of Interacting Quantum Par
 ticle Systems: preconditioning and simulation with random batches</a>\nby 
 Zhennan Zhou (Peking University) as part of Berkeley applied mathematics s
 eminar\n\n\nAbstract\nWe investigate the continuum limit that the number o
 f beads goes to infinity in the ring polymer representation of thermal ave
 rages. Studying the continuum limit of the trajectory sampling equation sh
 eds light on possible preconditioning techniques for sampling ring polymer
  configurations with large number of beads. In the case where the potentia
 l is quadratic\, we show that the continuum limit of the preconditioned ma
 ss modified Langevin dynamics converges to its equilibrium exponentially f
 ast\, which suggests that the finite-dimensional counterpart has a dimensi
 on-independent convergence rate. In the second part of the talk\, an effic
 ient sampling method\, the pmmLang+RBM\, is proposed to compute the quantu
 m thermal average in the interacting quantum particle system. Benefiting f
 rom the random batch method (RBM)\, the pmmLang+RBM reduces the complexity
  due to the interaction forces per timestep from O(NP^2) to O(NP)\, where 
 N is the number of beads and P is the number of particles. We also propose
  an extension of the pmmLang+RBM\, which is based on the splitting Monte C
 arlo method and is applicable when the interacting potential contains a si
 ngular part.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/34/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Phillip Colella (Lawrence Berkeley National Laboratory and UC Berk
 eley)
DTSTART:20210421T231000Z
DTEND:20210422T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/35
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/35/">Numerical Analysis of Particle-in-Cell Methods for Advection-Type
  Partial Differential Equations</a>\nby Phillip Colella (Lawrence Berkeley
  National Laboratory and UC Berkeley) as part of Berkeley applied mathemat
 ics seminar\n\n\nAbstract\nParticle-in-cell (PIC) methods for advection eq
 uations use particles that move along integral curves of the advection vel
 ocity to represent the primary dependent variables\, while using a structu
 red grid to which the particle state has been interpolated to compute the 
 dependence of the  velocities\, and forcing terms on the solution. PIC is 
 one of the oldest methods in numerical PDE\, dating back to the 1950s for 
 fluid dynamics\, and the 1960s for plasma physics\, and are still used ext
 ensively today. Nonetheless\, there appears to be no mathematically-system
 atic numerical analysis framework for understanding the error in PIC metho
 ds. This is in contrast to traditional finite-difference\, finite element\
 , and grid-free particle methods\, for which such framework exist and are 
 used very successfully to design methods for complex problems. In this tal
 k\, we will present such a numerical analysis framework for both advection
  and for kinetics problems. One of the principal results is that PIC metho
 ds\, as they are currently used in scientific applications\, have an O(1) 
 contribution to the error\, relative to the number of particles\, that gro
 ws exponentially in time. We will describe the source of this error\, and 
 strategies for controlling it.\n\nJoint work with Henry Boateng\, Bhavna S
 ingh\, Erick Velez\, and Colin Wahl.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/35/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Thomas Hou (Caltech)
DTSTART:20210901T231000Z
DTEND:20210902T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/36
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/36/">Potential singularity of 3D incompressible Euler equations and th
 e nearly singular behavior of 3D Navier-Stokes equations</a>\nby Thomas Ho
 u (Caltech) as part of Berkeley applied mathematics seminar\n\n\nAbstract\
 nWhether the 3D incompressible Euler and Navier-Stokes equations can devel
 op a finite time singularity from smooth initial data is one of the most c
 hallenging problems in nonlinear PDEs. In an effort to provide a rigorous 
 proof of the potential Euler singularity revealed by Luo-Hou's computation
 \, we develop a novel method of analysis and prove that the original De Gr
 egorio model and the Hou-Lou model develop a finite time singularity from 
 smooth initial data. Using this framework and some techniques from Elgindi
 's recent work on the Euler singularity\, we prove the finite time blowup 
 of the 2D Boussinesq and 3D Euler equations with $C^{1\,\\alpha}$ initial 
 velocity and boundary. Further\, we present some new numerical evidence th
 at the 3D incompressible Euler equations with smooth initial data develop 
 a potential finite time singularity at the origin\, which is quite differe
 nt from the Luo-Hou scenario. Our study also shows that the 3D Navier-Stok
 es equations develop nearly singular solutions with maximum vorticity incr
 easing by a factor of $10^7$. However\, the viscous effect eventually domi
 nates vortex stretching and the 3D Navier-Stokes equations narrowly escape
  finite time blowup. Finally\, we present strong numerical evidence that t
 he 3D Navier-Stokes equations with slowly decaying viscosity develop a fin
 ite time singularity.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/36/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Jeffrey Kuan (UC Berkeley)
DTSTART:20210908T231000Z
DTEND:20210909T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/37
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/37/">A stochastic fluid-structure interaction problem describing Stoke
 s flow interacting with a membrane</a>\nby Jeffrey Kuan (UC Berkeley) as p
 art of Berkeley applied mathematics seminar\n\n\nAbstract\nIn this talk\, 
 we present a well-posedness result for a stochastic fluid-structure intera
 ction model. We study a fully coupled stochastic fluid-structure interacti
 on problem\, with linear coupling between Stokes flow and an elastic struc
 ture modeled by the wave equation\, and stochastic noise in time acting on
  the structure. Such stochasticity is of interest in applications of fluid
 -structure interaction\, in which there is random noise present which may 
 affect the dynamics and statistics of the full system. We construct a solu
 tion by using a new splitting method for stochastic fluid-structure intera
 ction\, and probabilistic methods. To the best of our knowledge\, this is 
 the first result on well-posedness for fully coupled stochastic fluid-stru
 cture interaction. This is joint work with Sunčica Čanić (UC Berkeley).
 \n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/37/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Natalia Komarova (UC Irvine)
DTSTART:20210915T231000Z
DTEND:20210916T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/38
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/38/">Mathematical methods in cancer dynamics</a>\nby Natalia Komarova 
 (UC Irvine) as part of Berkeley applied mathematics seminar\n\n\nAbstract\
 nEvolutionary dynamics are at the core of carcinogenesis. Mathematical met
 hods can be used to study evolutionary processes\, such as selection and m
 utation\, and to shed light onto cancer origins\, progression\, and mechan
 isms of treatment. I will present two broad approaches to cancer modeling 
 that we have developed. One is concerned with near-equilibrium dynamics of
  stem cells\, with the goal of figuring out how tissue cell turnover is or
 chestrated\, and how control networks prevent “selfish” cell growth. T
 he other direction is studying evolutionary dynamics of drug resistance in
  cancer.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/38/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Michael Lindsey (Courant Institute)
DTSTART:20210922T231000Z
DTEND:20210923T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/39
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/39/">Embedding approaches for classical and quantum statistical mechan
 ics</a>\nby Michael Lindsey (Courant Institute) as part of Berkeley applie
 d mathematics seminar\n\n\nAbstract\nWe show how a synthesis of ideas from
  graphical models\, tensor networks\, optimal transport\, and semidefinite
  programming can be brought to bear on problems from classical and quantum
  statistical mechanics\, broadly construed. Specifically\, we discuss appl
 ications including classical and quantum spin systems on the lattice\, con
 tinuous global optimization\, and electronic structure.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/39/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Simon Becker (University of Cambridge)
DTSTART:20210929T231000Z
DTEND:20210930T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/40
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/40/">Mathematical properties of twisted bilayer graphene</a>\nby Simon
  Becker (University of Cambridge) as part of Berkeley applied mathematics 
 seminar\n\n\nAbstract\nTwistronics is the study of how the angle (the twis
 t) between layers of two-dimensional materials can change their electronic
  structure. When two sheets of graphene are twisted by those angles the re
 sulting material exhibits flat bands which\, as argued in the physics lite
 rature\, is related to superconductivity\, ferromagnetism\, and Mott-insul
 ators. I will start with a very simple operator whose spectral properties 
 are supposed to determine which angles are magical and describe some of th
 e mathematical challenges and results. Then\, I will introduce a method to
  study the response of this material to an external magnetic field in a re
 gime of large magnetic fields and explain some of the phenomena. Finally\,
  I will move on to even simpler one-dimensional models\, that naturally ap
 pear when strain is applied in one direction of the van der Waals material
  to make it periodic in one spatial direction\, which allow for a more ref
 ined mathematical analysis (Cantor spectrum and metal/insulator transition
 s). If time permits\, I will briefly touch upon the connection between suc
 h materials and topological insulators.\n\nThis is joint work with M Embre
 e\, R Kim\, J Wittsten\, X Zhu\, M Zworski.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/40/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Emanuel Gull (University of Michigan)
DTSTART:20211020T231000Z
DTEND:20211021T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/41
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/41/">Nevanlinna Analytical Continuation</a>\nby Emanuel Gull (Universi
 ty of Michigan) as part of Berkeley applied mathematics seminar\n\n\nAbstr
 act\nSimulations of finite temperature quantum systems provide imaginary f
 requency Green’s functions that correspond one-to-one to experimentally 
 measurable real-frequency spectra. However\, due to the bad conditioning o
 f the continuation transform from imaginary to real frequencies\, establis
 hed methods tend to either wash out spectral features at high frequencies 
 or produce spectral functions with unphysical negative parts. Here\, we sh
 ow that explicitly respecting the analytic ‘Nevanlinna' structure of the
  Green’s function leads to intrinsically positive and normalized spectra
 l functions and we present a continued fraction expansion that yields all 
 possible functions consistent with the analytic structure. Application to 
 synthetic trial data shows that sharp\, smooth\, and multi-peak data is re
 solved accurately. Application to the band structure of silicon demonstrat
 es that high energy features are resolved precisely. Continuations in a re
 alistic correlated setup reveal additional features that were previously u
 nresolved. By substantially increasing the resolution of the real frequenc
 y calculations\, our work overcomes one of the main limitations of finite-
 temperature quantum simulations.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/41/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Song Mei (UC Berkeley)
DTSTART:20211027T181000Z
DTEND:20211027T190000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/42
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/42/">The efficiency of kernel methods on structured datasets</a>\nby S
 ong Mei (UC Berkeley) as part of Berkeley applied mathematics seminar\n\n\
 nAbstract\nInspired by the proposal of tangent kernels of neural networks 
 (NNs)\, a recent research line aims to design kernels with a better genera
 lization performance on standard datasets. Indeed\, a few recent works sho
 wed that certain kernel machines perform as well as NNs on certain dataset
 s\, despite their separations in specific cases implied by theoretical res
 ults. Furthermore\, it was shown that the induced kernels of convolutional
  neural networks perform much better than any former handcrafted kernels. 
 These empirical results pose a theoretical challenge to understanding the 
 performance gaps in kernel machines and NNs in different scenarios.\n\nIn 
 this talk\, we show that data structures play an essential role in inducin
 g these performance gaps. We consider a few natural data structures\, and 
 study their effects on the performance of these learning methods. Based on
  a fine-grained high dimensional asymptotics framework of analyzing random
  features models and kernel machines\, we show the following: 1) If the fe
 ature vectors are nearly isotropic\, kernel methods suffer from the curse 
 of dimensionality\, while NNs can overcome it by learning the best low-dim
 ensional representation\; 2) If the feature vectors display the same low-d
 imensional structure as the target function (the spiked covariates model)\
 , this curse of dimensionality becomes milder\, and the performance gap be
 tween kernel methods and NNs become smaller\; 3) On datasets that display 
 some invariance structure (e.g.\, image dataset)\, there is a quantitative
  performance gain of using invariant kernels (e.g.\, convolutional kernels
 ) over inner product kernels. Beyond explaining the performance gaps\, the
 se theoretical results can further provide some intuitions towards designi
 ng kernel methods with better performance.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/42/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Jason Kaye (Flatiron institute)
DTSTART:20211111T001000Z
DTEND:20211111T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/43
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/43/">Efficient numerical algorithms for simulating quantum dynamics</a
 >\nby Jason Kaye (Flatiron institute) as part of Berkeley applied mathemat
 ics seminar\n\n\nAbstract\nI will describe a few new algorithms which redu
 ce computational bottlenecks in simulations of quantum many-body dynamics.
 \n\nIn time-dependent density functional theory (TDDFT)\, the many-body wa
 vefunction is approximated using a collection of single-particle wavefunct
 ions\, which independently satisfy the Schrodinger equation and are couple
 d through an effective potential. I will introduce a high-order\, FFT-base
 d solver for free space (nonperiodic) problems in TDDFT which sidesteps th
 e usual requirement of imposing artificial boundary conditions.\n\nMany-bo
 dy Green's functions\, which describe correlations between quantum observa
 bles\, enable practical simulations beyond the effective one-body picture 
 of TDDFT. The Green's functions satisfy history dependent Volterra integro
 -differential equations with kernel nonlinearities. I will outline efficie
 nt history integration algorithms which significantly extend feasible prop
 agation times in both equilibrium and nonequilibrium calculations.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/43/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Alexandre Chorin (UC Berkeley and LBNL)
DTSTART:20211209T001000Z
DTEND:20211209T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/44
DESCRIPTION:by Alexandre Chorin (UC Berkeley and LBNL) as part of Berkeley
  applied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/44/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yu Tong (UC Berkeley)
DTSTART:20211103T231000Z
DTEND:20211104T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/45
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/45/">Quantum eigenstate filtering and its applications</a>\nby Yu Tong
  (UC Berkeley) as part of Berkeley applied mathematics seminar\n\n\nAbstra
 ct\nIn this talk I will introduce a quantum algorithmic technique called q
 uantum eigenstate filtering\, which is based on approximation theory resul
 ts and the quantum singular value transformation. I will discuss its appli
 cations in preparing eigenstates\, solving quantum linear systems\, and es
 timating the ground state energy. For these tasks this technique leads to 
 significantly better query complexities\, fewer ancilla qubits\, and does 
 so without requiring complex subroutines that may not be realistically imp
 lementable. Besides these algorithmic applications\, the essential idea al
 so leads to a useful proof technique for studying the ground state propert
 y of quantum many-body systems.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/45/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Di Fang (UC Berkeley)
DTSTART:20211006T231000Z
DTEND:20211007T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/46
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/46/">Time-dependent unbounded Hamiltonian simulation with vector norm 
 scaling</a>\nby Di Fang (UC Berkeley) as part of Berkeley applied mathemat
 ics seminar\n\n\nAbstract\nHamiltonian simulation is a basic task in quant
 um computation. The accuracy of such simulation is usually measured by the
  error of the unitary evolution operator in the operator norm\, which in t
 urn depends on certain norm of the Hamiltonian. For unbounded operators\, 
 after suitable discretization\, the norm of the Hamiltonian can be very la
 rge\, which significantly increases the simulation cost. However\, the ope
 rator norm measures the worst-case error of the quantum simulation\, while
  practical simulation concerns the error with respect to a given initial v
 ector at hand. We demonstrate that under suitable assumptions of the Hamil
 tonian and the initial vector\, if the error is measured in terms of the v
 ector norm\, the computational cost may not increase at all as the norm of
  the Hamiltonian increases using Trotter type methods. In this sense\, our
  result outperforms all previous error bounds in the quantum simulation li
 terature. We also clarify the existence and the importance of commutator s
 calings of Trotter and generalized Trotter methods for time-dependent Hami
 ltonian simulations.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/46/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Franziska Weber (Carnegie Mellon University)
DTSTART:20211013T231000Z
DTEND:20211014T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/47
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/47/">A Convergent Numerical Method for a Model of Liquid Crystal Direc
 tor Coupled to An Electric Field</a>\nby Franziska Weber (Carnegie Mellon 
 University) as part of Berkeley applied mathematics seminar\n\n\nAbstract\
 nStarting from the Oseen-Frank theory\, we derive a simple model for the d
 ynamics of a nematic liquid crystal director field under the influence of 
 an electric field. The resulting nonlinear system of partial differential 
 equations consists of the electrostatics equations for the electric field 
 coupled with the damped wave map equation for the evolution of the liquid 
 crystal director field\, which is a normal vector pointing in the directio
 n of the main orientation of the liquid crystal molecules. The liquid crys
 tal director field enters the electrostatics equations in the constitutive
  relations while the electric field enters the wave map equation in the fo
 rm of a nonlinear source term. Since it is a normal vector\, the variable 
 for the liquid crystal director field has to satisfy the constraint that i
 t takes values in the unit sphere. We derive an energy-stable and constrai
 nt preserving numerical method for this system and prove convergence of a 
 subsequence of approximations to a weak solution of the system of partial 
 differential equations. In particular\, this implies the existence of weak
  solutions for this model.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/47/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Aditi Krishnapriyan (Lawrence Berkeley National Lab)
DTSTART:20211202T001000Z
DTEND:20211202T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/48
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/48/">Integrating machine learning with physics-based spatial and tempo
 ral modeling</a>\nby Aditi Krishnapriyan (Lawrence Berkeley National Lab) 
 as part of Berkeley applied mathematics seminar\n\n\nAbstract\nDeep learni
 ng has achieved great success in numerous areas\, and is also seeing incre
 asing interest in scientific applications. However\, challenges still rema
 in: scientific phenomena are difficult to model\, and can also be limited 
 by a lack of training data. As a result\, scientific machine learning appr
 oaches are being developed by incorporating domain knowledge into the mach
 ine learning process to enable more accurate and general predictions. One 
 such popular approach\, colloquially known as physics-informed neural netw
 orks (PINNs)\, incorporates domain knowledge as soft constraints on an emp
 irical loss function. I will discuss the challenges associated with such a
 n approach\, and show that by changing the learning paradigm to curriculum
  regularization or sequence-to-sequence learning\, we can achieve signific
 antly lower error. Another approach\, colloquially known as ODE-Nets\, aim
 s to couple dynamical systems/numerical methods with neural networks. I wi
 ll discuss how exploiting techniques from numerical analysis for these sys
 tems can enable learning continuous dynamics for scientific problems. This
  method will be illustrated by showing that it can: resolve fine-scale fea
 tures in a temporal solution despite training on coarse data\, successfull
 y resolve fine-scale features in the temporal solution even when the train
 ing data is irregularly spaced with non-uniform time intervals\, and learn
  dynamics from image snapshots by generating super-resolution videos at hi
 gher frame rates of the much finer solution.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/48/
END:VEVENT
BEGIN:VEVENT
SUMMARY:No seminar
DTSTART:20220127T001000Z
DTEND:20220127T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/49
DESCRIPTION:by No seminar as part of Berkeley applied mathematics seminar\
 n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/49/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Alina Chertock (North Carolina State University)
DTSTART:20220203T001000Z
DTEND:20220203T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/50
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/50/">Structure Preserving Numerical Methods for Hyperbolic Systems of 
 Conservation and Balance Laws</a>\nby Alina Chertock (North Carolina State
  University) as part of Berkeley applied mathematics seminar\n\n\nAbstract
 \nMany physical models\, while quite different in nature\, can be describe
 d by nonlinear hyperbolic systems of conservation and balance laws. The ma
 in source of difficulties one comes across when numerically solving these 
 systems is lack of smoothness as solutions of hyperbolic conservation/bala
 nce laws may develop very complicated nonlinear wave structures including 
 shocks\, rarefaction waves and contact discontinuities. The level of compl
 exity may increase even further when solutions of the hyperbolic system re
 veal a multiscale character and/or the system includes additional terms su
 ch as friction terms\, geometrical terms\, nonconservative products\, etc.
 \, which are needed to be taken into account in order to achieve a proper 
 description of the studied physical phenomena. In such cases\, it is extre
 mely important to design a numerical method that is not only consistent wi
 th the given PDEs\, but also preserves certain structural and asymptotic p
 roperties of the underlying problem at the discrete level. While a variety
  of numerical methods for such models have been successfully developed\, t
 here are still many open problems\, for which the derivation of reliable h
 igh-resolution numerical methods still remains to be an extremely challeng
 ing task.\n\nIn this talk\, I will discuss recent advances in the developm
 ent of two classes of structure preserving numerical methods for nonlinear
  hyperbolic systems of conservation and balance laws. In particular\, I wi
 ll present (i) well-balanced and positivity preserving numerical schemes\,
  that is\, the methods which are capable of exactly preserving some steady
 -state solutions as well as maintaining the positivity of the numerical qu
 antities when it is required by the physical application\, and (ii) asympt
 otic preserving schemes\, which provide accurate and efficient numerical s
 olutions in certain stiff and/or asymptotic regimes of physical interest.\
 n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/50/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yunan Yang (ETH Zurich)
DTSTART:20220209T181000Z
DTEND:20220209T190000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/51
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/51/">Adjoint DSMC Method for Boltzmann-Constrained Optimization Proble
 ms</a>\nby Yunan Yang (ETH Zurich) as part of Berkeley applied mathematics
  seminar\n\n\nAbstract\nApplications for kinetic equations such as optimal
  design and inverse problems often involve finding unknown parameters thro
 ugh gradient-based optimization algorithms. Based on the adjoint-state met
 hod\, we derive two different frameworks for approximating the gradient of
  an objective functional constrained by the nonlinear Boltzmann equation. 
 While the forward problem can be solved by the Direct Simulation Monte Car
 lo (DSMC) method\, it is difficult to efficiently solve the high-dimension
 al continuous adjoint equation obtained by the "optimize-then-discretize" 
 approach. This challenge motivates us to propose an adjoint DSMC method fo
 llowing the "discretize-then-optimize" approach for Boltzmann-constrained 
 optimization. We also analyze the properties of the two frameworks and the
 ir connections. Several numerical examples are presented to demonstrate th
 eir accuracy and efficiency.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/51/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Andre Laestadius (Hylleraas Centre for Quantum Molecular Sciences)
DTSTART:20220224T001000Z
DTEND:20220224T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/52
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/52/">Energy error estimate for coupled-cluster excited states</a>\nby 
 Andre Laestadius (Hylleraas Centre for Quantum Molecular Sciences) as part
  of Berkeley applied mathematics seminar\n\n\nAbstract\nIn our recent work
 \, the nonlinear equations of the single-reference Coupled-Cluster method 
 have been analyzed using topological degree theory. This generalizes previ
 ous work based on (local) strong monotonicity. We have established existen
 ce results and qualitative information about the solutions of these equati
 ons that also sheds light on some of the numerically observed behavior. In
  particular\, to investigate truncation schemes within the Coupled-Cluster
  method\, we have utilized the Kowalski-Piecuch homotopy. In this setting\
 , we have derived an energy error bound for approximate eigenstates of the
  Schrödinger equation\, i.e.\, for both ground and excited states.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/52/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Samuel Olivier (University of California\, Berkeley)
DTSTART:20220303T001000Z
DTEND:20220303T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/53
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/53/">High Order Finite Element Discretizations of the Variable Eddingt
 on Factor Equations for Accelerating Radiation Transport Calculations on C
 urved Meshes</a>\nby Samuel Olivier (University of California\, Berkeley) 
 as part of Berkeley applied mathematics seminar\n\n\nAbstract\nThe Variabl
 e Eddington Factor (VEF) method is one of the oldest techniques for solvin
 g the radiation transport equation. In VEF\, the kinetic equation is itera
 tively coupled to the moment equations through discrete closures. This mom
 ent-based approach enables significant algorithmic flexibility and more ef
 ficient multiphysics coupling. However\, despite considerable attention in
  the literature\, VEF is rarely used in practice due to the lack of scalab
 le iterative preconditioners for the discretized moment equations. In this
  talk\, I present three classes of VEF methods with high-order accuracy on
  curved meshes that can be efficiently and scalably solved. Discretization
  and preconditioning techniques known to be effective on simpler model ell
 iptic problems are extended to the VEF moment equations to derive Disconti
 nuous Galerkin\, continuous finite element\, and mixed finite element VEF 
 methods. These methods are demonstrated to be effective on a proxy problem
  from thermal radiative transfer in both outer transport iterations and in
 ner preconditioned linear solver iterations and to scale out to 1152 proce
 ssors and over 10 million scalar flux unknowns.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/53/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Michael I Weinstein (Columbia University)
DTSTART:20220406T231000Z
DTEND:20220407T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/54
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/54/">Discrete honeycombs\, rational edges and edge states</a>\nby Mich
 ael I Weinstein (Columbia University) as part of Berkeley applied mathemat
 ics seminar\n\n\nAbstract\nWe first discuss the derivation of tight bindin
 g (discrete) Hamiltonians from an underlying continuum Schroedinger Hamilt
 onians in both non-magnetic and strongly magnetic systems (joint works wit
 h with CL Fefferman and J Shapiro).\n\nWe then present very recent work (w
 ith CL Fefferman and S Fliss) on the tight binding model of graphene\, sha
 rply terminated along a rational edge\, a line I parallel to a direction o
 f translational symmetry of the underlying period lattice. We classify suc
 h edges into those of "zigzag type" and those of "armchair type"\, general
 izing the classical zigzag and armchair edges. Edge states are eigenstates
  which are plane wave like in  directions parallel to the edge and are loc
 alized in directions transverse to the edge. We prove that zero energy/fla
 t band edge states arise for edges of zigzag type\, but never for those of
  armchair type. We exhibit explicit formulas for flat band edge states whe
 n they exist. Finally\, we produce strong evidence for the existence of di
 spersive (non flat) edge state curves of nonzero energy for most rational 
 edges.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/54/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Houman Owhadi (California Institute of Technology)
DTSTART:20220427T231000Z
DTEND:20220428T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/55
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/55/">Computational Graph Completion</a>\nby Houman Owhadi (California 
 Institute of Technology) as part of Berkeley applied mathematics seminar\n
 \n\nAbstract\nWe present a framework for generating\, organizing\, and rea
 soning with computational knowledge. It is motivated by the observation th
 at most problems in Computational Sciences and Engineering (CSE) can be fo
 rmulated as that of completing (from data) a computational graph (or hyper
 graph) representing dependencies between functions and variables. Nodes re
 present variables\, and edges represent functions. Functions and variables
  may be known\, unknown\, or random. Data comes in the form of observation
 s of distinct values of a finite number of subsets of the variables of the
  graph (satisfying its functional dependencies). The underlying problem co
 mbines a regression problem  (approximating unknown functions) with a matr
 ix completion problem (recovering unobserved variables in the data). Repla
 cing unknown functions by  Gaussian Processes (GPs) and conditioning on ob
 served data provides a simple but efficient approach to completing such gr
 aphs. Since this completion process can be reduced to an algorithm\, as on
 e solves $\\sqrt{2}$ on a pocket calculator without thinking about it\, on
 e could\, with the automation of the proposed framework\, solve a complex 
 CSE problem by drawing a diagram.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/55/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Jingwei Hu (University of Washington)
DTSTART:20220217T001000Z
DTEND:20220217T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/56
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/56/">An efficient dynamical low-rank algorithm for the Boltzmann-BGK e
 quation close to the compressible viscous flow regime</a>\nby Jingwei Hu (
 University of Washington) as part of Berkeley applied mathematics seminar\
 n\n\nAbstract\nIt has recently been demonstrated that dynamical low-rank a
 lgorithms can provide robust and efficient approximations to a range of ki
 netic equations. This is true especially if the solution is close to some 
 asymptotic limit where it is known that the solution is low-rank. A partic
 ularly interesting case is the fluid dynamic limit that is commonly obtain
 ed in the limit of small Knudsen number. However\, in this case the Maxwel
 lian which describes the corresponding equilibrium distribution is not nec
 essarily low-rank\; because of this\, the methods known in the literature 
 are only applicable to the weakly compressible case. In this paper\, we pr
 opose an efficient dynamical low-rank integrator that can capture the flui
 d limit—the Navier–Stokes equations—of the Boltzmann-BGK model even 
 in the compressible regime. This is accomplished by writing the solution a
 s f = Mg\, where M is the Maxwellian and the low-rank approximation is onl
 y applied to g. To efficiently implement this decomposition within a low-r
 ank framework requires\, in the isothermal case\, that certain coefficient
 s are evaluated using convolutions\, for which fast algorithms are known. 
 Using the proposed decomposition also has the advantage that the rank requ
 ired to obtain accurate results is significantly reduced compared to the p
 revious state of the art. We demonstrate this by performing a number of nu
 merical experiments and also show that our method is able to capture sharp
  gradients/shock waves. This is joint work with Lukas Einkemmer (Innsbruck
 ) and Lexing Ying (Stanford).\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/56/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Guillaume Bal (University of Chicago)
DTSTART:20220330T231000Z
DTEND:20220331T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/57
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/57/">Asymmetric transport and topological invariants</a>\nby Guillaume
  Bal (University of Chicago) as part of Berkeley applied mathematics semin
 ar\n\n\nAbstract\nRobust asymmetric transport at the interface between two
 -dimensional insulating bulks has been observed in many areas of (geo)phys
 ical and materials sciences. The main practical appeal of this asymmetry i
 s its immunity to large classes of perturbations. This stability is explai
 ned by topological considerations.\n \nA physical observable\, a one-dimen
 sional conductivity\, is assigned to the asymmetric transport. Interface H
 amiltonians modeling the transition between the bulk phases are next intro
 duced and classified by a topological charge\, the index of an appropriate
  Fredholm operator. A general principle\, the bulk-edge correspondence\, t
 hen states that the conductivity is quantized and equal to the topological
  charge\, which may be interpreted as a difference of bulk topologies.\n \
 nWhile ubiquitous in the physical and engineering literatures\, the bulk-e
 dge correspondence remains difficult to establish mathematically or in fac
 t even heuristically. This talk presents recent results on the derivation 
 of the correspondence for reasonably large algebras of (pseudo-)differenti
 al operators that appear generically as low-energy large-wavelength models
  in the applications. We use the correspondence to compute the asymmetry i
 n several settings where a direct estimation seems hopeless\, with applica
 tions\, e.g.\, in graphene-based Floquet topological insulators and topolo
 gical properties of twisted bilayer graphene.\n \nTime permitting\, we wil
 l contrast the above spectral properties with the practically more relevan
 t temporal picture and\, for instance\, the propagation of semi-classical 
 wavepackets along curved interfaces.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/57/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Eitan Tadmor (University of Maryland)
DTSTART:20220316T231000Z
DTEND:20220317T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/58
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/58/">Hierarchical decomposition of images and the problem of Bourgain-
 Brezis</a>\nby Eitan Tadmor (University of Maryland) as part of Berkeley a
 pplied mathematics seminar\n\n\nAbstract\nEdges are noticeable features in
  images which can be extracted from noisy data using different variational
  models. The analysis of such models leads to the question of expressing g
 eneral L^2-data\, f\, as the divergence of uniformly bounded vector fields
 \, div(U). We present a multi-scale approach to construct uniformly bounde
 d solutions of div(U)=f for general f’s in the critical regularity space
  L^d(T^d). The study of this equation and related problems was motivated b
 y results of Bourgain & Brezis. The intriguing critical aspect here is tha
 t although the problems are linear\, construction of their solution is not
 . Our constructive solution for such problems is a special case of a rathe
 r general framework for solving linear equations\, formulated as inverse p
 roblems in critical regularity spaces. The solutions are realized in terms
  of nonlinear hierarchical decomposition\, U=image001.png\, which we intro
 duced earlier in the context of image processing\, and yield a multi-scale
  decomposition of “objects” U.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/58/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Dejan Slepcev (Carnegie Mellon University)
DTSTART:20220413T231000Z
DTEND:20220414T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/59
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/59/">Proper regularizers for semi-supervised learning</a>\nby Dejan Sl
 epcev (Carnegie Mellon University) as part of Berkeley applied mathematics
  seminar\n\n\nAbstract\nWe will discuss a standard problem of semi-supersi
 sed learning: given a data set (considered as a point cloud in a euclidean
  space) with a small number of labeled points the task is to extrapolate t
 he label values to the whole data set. In order to utilize the geometry of
  the dataset one creates a graph by connecting the nodes which are suffici
 ently close. Many standard approaches rely on minimizing graph-based funct
 ionals\, which reward the agreement with the labels and the regularity of 
 the estimator. Choosing a good regularization leads to questions about the
  relations between discrete functionals in random setting and continuum no
 nlocal and differential functionals. We will discuss how insights about th
 is relation  provide ways to properly choose the functionals for semi-supe
 rvised learning and appropriately set the weights of the graph so that the
  information is propagated in a desirable way from the labeled points. The
 oretical results\, numerical illustrations and performance on standard tes
 t data sets will be provided.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/59/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Minh Tran (MIT)
DTSTART:20220420T231000Z
DTEND:20220421T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/60
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/60/">The propagation of information in power-law interacting systems</
 a>\nby Minh Tran (MIT) as part of Berkeley applied mathematics seminar\n\n
 \nAbstract\nMost physical many-body quantum systems are geometrically loca
 l\; it takes time to propagate quantum information in the systems. Such lo
 cality imposes fundamental limits on many quantum information processing t
 asks. In this talk\, we will review the state-of-the-art speed limits for 
 the propagation of information in quantum systems with power-law interacti
 ons. We discuss applications of the speed limits and\, in particular\, use
  them to constrain the propagation of error and improve the performance of
  quantum simulation algorithms. Inversely\, we also prove new speed limits
  using quantum simulation algorithms\, suggesting a deep connection betwee
 n the propagation of information and digital quantum simulation.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/60/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Spring break. No seminar
DTSTART:20220323T231000Z
DTEND:20220324T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/61
DESCRIPTION:by Spring break. No seminar as part of Berkeley applied mathem
 atics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/61/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Michael Franco (University of California\, Berkeley)
DTSTART:20220310T001000Z
DTEND:20220310T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/62
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/62/">Relating high-order fluid flow problems to simpler subproblems to
  create efficient preconditioners</a>\nby Michael Franco (University of Ca
 lifornia\, Berkeley) as part of Berkeley applied mathematics seminar\n\n\n
 Abstract\nThis talk will focus on two solvers for high-order methods\, wit
 h the common thread being that their efficiency derives from relating the 
 original problem to a simpler subproblem. First\, a matrix-free flow solve
 r for high-order finite element discretizations of the incompressible Navi
 er-Stokes and Stokes equations with GPU acceleration will be presented. Fo
 r high polynomial degrees\, assembling the matrix for the linear systems r
 esulting from the finite element discretization can be prohibitively expen
 sive\, both in terms of computational complexity and memory. For this reas
 on\, it is necessary to develop matrix-free operators and preconditioners\
 , which can be used to efficiently solve these linear systems without acce
 ss to the matrix entries themselves. Particular attention will be given to
  the matrix-free operator evaluations that utilize GPU-accelerated sum-fac
 torization techniques to minimize memory movement and maximize throughput.
  I will also briefly introduce novel preconditioners based on a low-order 
 refined methodology with parallel subspace corrections. Second\, I will in
 troduce a novel class of iterative subregion correction preconditioners fo
 r solving flow problems with geometrically localized stiffness. Just as mu
 ltigrid methods spend more effort on cheaper grids to apply a correction t
 hat improves convergence on lower frequency components\, our subregion cor
 rection preconditioners spend more effort on a subregion of the domain dem
 onstrating slow convergence to improve overall convergence rates. Converge
 nce theory and numerical results validating this theory will be presented.
 \n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/62/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Di Fang (University of California\, Berkeley)
DTSTART:20220225T001000Z
DTEND:20220225T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/63
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/63/">Mathematics Department Colloquium: Quantum algorithms for Hamilto
 nian simulation with unbounded operators</a>\nby Di Fang (University of Ca
 lifornia\, Berkeley) as part of Berkeley applied mathematics seminar\n\nLe
 cture held in 60 Evans Hall.\n\nAbstract\nRecent years have witnessed trem
 endous progress in developing and analyzing quantum algorithms for quantum
  dynamics simulation of bounded operators (Hamiltonian simulation). Howeve
 r\, many scientific and engineering problems require the efficient treatme
 nt of unbounded operators\, which frequently arise due to the discretizati
 on of differential operators. Such applications include molecular dynamics
 \, electronic structure theory\, quantum control and quantum differential 
 equations solver. We will introduce some recent advances in quantum algori
 thms for efficient unbounded Hamiltonian simulation\, including Trotter-ty
 pe splitting and the quantum highly oscillatory protocol (qHOP) in the int
 eraction picture. The latter yields a surprising superconvergence result f
 or regular potentials.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/63/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Mo Zhou (Duke University)
DTSTART:20220907T231000Z
DTEND:20220908T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/64
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/64/">Neural network approaches for high dimensional problems</a>\nby M
 o Zhou (Duke University) as part of Berkeley applied mathematics seminar\n
 \n\nAbstract\nNeural networks are effective tools for solving high dimensi
 onal problems. In this talk\, I will summarize the popular methods to solv
 e high dimensional problems with neural networks. Then I will briefly intr
 oduce two of my works based on the DeepBSDE method. In the first work\, we
  solve the eigenvalue problem by transforming it into a fixed-point formul
 ation\, which is a diffusion Monte Carlo like approach. In the second work
 \, we leverage the actor-critic framework from reinforcement learning to s
 olve the static Hamilton—Jacobi—Bellman equations. We propose a varian
 ce reduced temporal difference method for the critic and apply an adaptive
  step size algorithm for the actor to improve accuracy.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/64/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Li Wang (University of Minnesota)
DTSTART:20220921T231000Z
DTEND:20220922T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/65
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/65/">Variational methods for gradient flow</a>\nby Li Wang (University
  of Minnesota) as part of Berkeley applied mathematics seminar\n\n\nAbstra
 ct\nIn this talk\, I will introduce a general variational framework for no
 nlinear evolution equations with a gradient flow structure\, which arise i
 n material science\, animal swarms\, chemotaxis\, and deep learning\, amon
 g many others. Building upon this framework\, we develop numerical methods
  that have built-in properties such as positivity preserving and entropy d
 ecreasing\, and resolve stability issues due to the strong nonlinearity. T
 wo specific applications will be discussed. One is the Wasserstein gradien
 t flow\, where the major challenge is to compute the Wasserstein distance 
 and resulting optimization problem. I will show techniques to overcome the
 se difficulties. The other is to simulate crystal surface evolution\, whic
 h suffers from significant stiffness and therefore prevents simulation wit
 h traditional methods on fine spatial grids. On the contrary\, our method 
 resolves this issue and is proved to converge at a rate independent of the
  grid size.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/65/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Felix Leditzky (UIUC)
DTSTART:20220928T231000Z
DTEND:20220929T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/66
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/66/">The platypus of the quantum channel zoo</a>\nby Felix Leditzky (U
 IUC) as part of Berkeley applied mathematics seminar\n\n\nAbstract\nUnders
 tanding quantum channels and the strange behavior of their capacities is a
  key driver of quantum information theory. Despite having rigorous coding 
 theorems\, quantum capacities are poorly understood due to super-additivit
 y effects. We will talk about a remarkably simple\, low-dimensional\, sing
 le-parameter family of quantum channels with exotic quantum information-th
 eoretic features. As the simplest example from this family\, we focus on a
  qutrit-to-qutrit channel that is intuitively obtained by hybridizing toge
 ther a simple degradable channel and a completely useless qubit channel. S
 uch hybridizing makes this channel's capacities behave in a variety of int
 eresting ways. For instance\, the private and classical capacity of this c
 hannel coincide and can be explicitly calculated\, even though the channel
  does not belong to any class for which the underlying information quantit
 ies are known to be additive. Moreover\, the quantum capacity of the chann
 el can be computed explicitly\, given a clear and compelling conjecture is
  true. This "spin alignment conjecture\," which may be of independent inte
 rest\, is proved in certain special cases and additional numerical evidenc
 e for its validity is provided. We further show that this qutrit channel d
 emonstrates superadditivity when transmitting quantum information jointly 
 with a variety of assisting channels\, in a manner unknown before. A highe
 r-dimensional variant of this qutrit channel displays super-additivity of 
 quantum capacity together with an erasure channel. Subject to the spin-ali
 gnment conjecture\, our results on super-additivity of quantum capacity ex
 tend to lower-dimensional channels as well as larger parameter ranges. In 
 particular\, super-additivity occurs between two weakly additive channels 
 each with large capacity on their own\, in stark contrast to previous resu
 lts. Remarkably\, a single\, novel transmission strategy achieves super-ad
 ditivity in all examples. Our results show that super-additivity is much m
 ore prevalent than previously thought. It can occur across a wide variety 
 of channels\, even when both participating channels have large quantum cap
 acity.\n\nThis is joint work with Debbie Leung\, Vikesh Siddhu\, Graeme Sm
 ith\, and John Smolin\, and based on the papers https://arxiv.org/abs/2202
 .08380 and https://arxiv.org/abs/2202.08377.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/66/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Chao Ma (Stanford University)
DTSTART:20221005T231000Z
DTEND:20221006T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/67
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/67/">Implicit bias of optimization algorithms for neural networks and 
 their effects on generalization</a>\nby Chao Ma (Stanford University) as p
 art of Berkeley applied mathematics seminar\n\n\nAbstract\nModern neural n
 etworks are usually over-parameterized—the number of parameters exceeds 
 the number of training data. In this case the loss functions tend to have 
 many (or even infinite) global minima\, which imposes an additional challe
 nge of minima selection on optimization algorithms besides the convergence
 . Specifically\, when training a neural network\, the algorithm not only h
 as to find a global minimum\, but also needs to select minima with good ge
 neralization among many other bad ones. In this talk\, I will share a seri
 es of works studying the mechanisms that facilitate global minima selectio
 n of optimization algorithms. First\, with a linear stability theory\, we 
 show that stochastic gradient descent (SGD) favors flat and uniform global
  minima. Then\, we build a theoretical connection of flatness and generali
 zation performance based on a special structure of neural networks. Next\,
  we study the global minima selection dynamics—the process that an optim
 izer leaves bad minima for good ones—in two settings. For a manifold of 
 minima around which the loss function grows quadratically\, we derive effe
 ctive exploration dynamics on the manifold for SGD and Adam\, using a quas
 istatic approach. For a manifold of minima around which the loss function 
 grows subquadratically\, we study the behavior and effective dynamics for 
 GD\, which also explains the edge of stability phenomenon.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/67/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Mark Fornace (Caltech)
DTSTART:20221012T231000Z
DTEND:20221013T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/68
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/68/">Theoretical methods for nucleic acid secondary structure thermody
 namics and kinetics</a>\nby Mark Fornace (Caltech) as part of Berkeley app
 lied mathematics seminar\n\n\nAbstract\nNucleic acid secondary structure m
 odels offer a simplified but powerful lens through which to view\, analyze
 \, and design nucleic acid chemistry. Computational approaches based on su
 ch models are central to current research directions across molecular prog
 ramming and the life sciences more broadly. Considering only structures in
 volving noncrossing partitions of nucleotides\, dynamic programming algori
 thms can exactly compute equilibrium quantities (with respect to an approx
 imate free energy model) in cubic complexity. I first show how such algori
 thms may be improved in speed\, augmented in accuracy\, and unified across
  a variety of physical quantities.\n\nWhile analysis and design paradigms 
 for nucleic acid thermodynamics are long-established in essence\, nucleic 
 acid kinetics have proved vexing for accurate and principled estimation al
 gorithms. Past approaches have thus generally relied on stochastic simulat
 ion of the respective continuous time Markov chains (an asymptotically cor
 rect but computationally costly approach). In contrast\, I show how a prin
 cipled Galerkin-type approach to the kinetics proves remarkably amenable t
 o deterministic estimation by dynamic programming algorithms. While inexac
 t\, the approach proves empirically accurate and is theoretically extensib
 le to treatments of mass-action kinetics\, macrostate models\, and sequenc
 e design.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/68/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Li Gao (University of Houston)
DTSTART:20221019T231000Z
DTEND:20221020T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/69
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/69/">Logarithmic Sobolev inequalities for matrices and matrix-valued f
 unctions</a>\nby Li Gao (University of Houston) as part of Berkeley applie
 d mathematics seminar\n\n\nAbstract\nLogarithmic Sobolev inequalities\, fi
 rst introduced by Gross in 70s\, have rich connections to probability\, ge
 ometry\, as well as information theory. In recent years\, logarithmic Sobo
 lev inequalities for quantum Markov semigroups attracted a lot of attentio
 ns for its applications in quantum information theory and quantum many-bod
 y systems. In this talk\, I'll present a simple\, information-theoretic ap
 proach to modified logarithmic Sobolev inequalities for both quantum Marko
 v semigroup on matrices\, and classical Markov semigroup on matrix-valued 
 functions. In the classical setting\, our results implies every sub-Laplac
 ian of a Hörmander system admits a uniform  modified logarithmic Sobolev 
 constant for all its matrix valued functions. For quantum Markov semigroup
 s\, we improve a previous result of Gao and Rouzé by replacing the dimens
 ion constant by its logarithm. This talk is based on a joint work with Mar
 ius Junge\, Nicholas\, LaRacunte\, and Haojian Li.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/69/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Matthew Colbrook (University of Cambridge)
DTSTART:20221024T231000Z
DTEND:20221025T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/70
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/70/">Residual Dynamic Mode Decomposition: Rigorous Data-Driven Computa
 tion of Spectral Properties of Koopman Operators for Dynamical Systems</a>
 \nby Matthew Colbrook (University of Cambridge) as part of Berkeley applie
 d mathematics seminar\n\n\nAbstract\nKoopman operators are infinite-dimens
 ional operators that globally linearize\nnonlinear dynamical systems\, mak
 ing their spectral information valuable for\nunderstanding dynamics. Howev
 er\, Koopman operators can have continuous\nspectra\, can lack finite-dime
 nsional invariant subspaces\, and approximations can\nsuffer from spectral
  pollution (spurious modes). These issues make computing\nthe spectral pro
 perties of Koopman operators a considerable challenge. This two-\npart tal
 k will detail the first scheme (ResDMD) with convergence guarantees for\nc
 omputing the spectra and pseudospectra of general Koopman operators from\n
 snapshot data. Furthermore\, we use the resolvent operator and ResDMD to\n
 compute smoothed approximations of spectral measures (including continuous
 \nspectra)\, with explicit high-order convergence. ResDMD is similar to ex
 tended\nDMD\, except it rigorously concurrently computes a residual from t
 he same\nsnapshot data\, allowing practitioners to gain confidence in the 
 computed results.\nKernelized variants of our algorithms allow for dynamic
 al systems with a high-\ndimensional state-space\, and the error control p
 rovided by ResDMD allows a\nposteriori verification of learnt dictionaries
 . We apply ResDMD to compute the\nspectral measure associated with the dyn
 amics of a protein molecule (20\,046-dimensional state-space) and demonstr
 ate several problems in fluid dynamics\n(with state-space dimensions > 100
 \,000). For example\, we compare ResDMD\nand DMD for particle image veloci
 metry data from turbulent wall-jet flow\, the\nacoustic signature of laser
 -induced plasma\, and turbulent flow past a cascade of\naerofoils.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/70/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Samuel Lanthaler (Caltech)
DTSTART:20221110T001000Z
DTEND:20221110T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/71
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/71/">Supervised learning in function space</a>\nby Samuel Lanthaler (C
 altech) as part of Berkeley applied mathematics seminar\n\n\nAbstract\nNeu
 ral networks have proven to be effective approximators of high dimensional
  functions in a wide variety of applications. In scientific applications t
 he goal is often to approximate an underlying operator\, which defines a m
 apping between infinite-dimensional spaces of input and output functions. 
 Extensions of neural networks to this infinite-dimensional setting have be
 en proposed in recent years\, giving rise to the rapidly emerging field of
  operator learning. Despite their practical success\, our theoretical unde
 rstanding of these approaches is still in its infancy. In this talk\, I wi
 ll review some of the proposed operator learning architectures (deep opera
 tor networks/neural operators)\, and present recent results on their appro
 ximation theory and sample complexity. This work identifies basic mechanis
 ms by which neural operators can avoid a curse of dimensionality in the un
 derlying (very high- or even infinite-dimensional) approximation task\, th
 us providing a first rationale for their practical success for concrete op
 erators of interest. The analysis also reveals fundamental limitations of 
 some of these approaches.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/71/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Lucas Bouck (University of Maryland)
DTSTART:20221117T001000Z
DTEND:20221117T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/72
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/72/">Finite Element Approximation of a Membrane Model for Liquid Cryst
 al Polymeric Networks</a>\nby Lucas Bouck (University of Maryland) as part
  of Berkeley applied mathematics seminar\n\n\nAbstract\nLiquid crystal pol
 ymeric networks are materials where a nematic liquid crystal is coupled wi
 th a rubbery material. When actuated with heat or light\, the interaction 
 of the liquid crystal with the rubber creates complex shapes. Starting fro
 m the classical 3D trace formula energy of Bladon\, Warner and Terentjev (
 1994)\, we derive a 2D membrane energy as the formal asymptotic limit of t
 he 3D energy. The derivation is similar to derivations in Ozenda\, Sonnet\
 , and Virga (2020) and Cirak et. al. (2014). We characterize the zero ener
 gy deformations and prove that the energy lacks certain convexity properti
 es. We propose a finite element method to discretize the problem. To addre
 ss the lack of convexity of the membrane energy\, we regularize with a ter
 m that mimics a higher order bending energy. We prove that minimizers of t
 he discrete energy converge to minimizers of the continuous energy. For mi
 nimizing the discrete problem\, we employ a nonlinear gradient flow scheme
 \, which is energy stable. Additionally\, we present computations showing 
 the geometric effects that arise from liquid crystal defects. Computations
  of configurations from nonisometric origami are also presented.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/72/
END:VEVENT
BEGIN:VEVENT
SUMMARY:No seminar. Happy thanksgiving.
DTSTART:20221124T001000Z
DTEND:20221124T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/73
DESCRIPTION:by No seminar. Happy thanksgiving. as part of Berkeley applied
  mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/73/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Sui Tang (UCSB)
DTSTART:20221201T001000Z
DTEND:20221201T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/74
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/74/">Bridging the interacting particle models and data science via Gau
 ssian process</a>\nby Sui Tang (UCSB) as part of Berkeley applied mathemat
 ics seminar\n\n\nAbstract\nSystem of interacting particles that display a 
 wide variety of collective behaviors are ubiquitous in science and enginee
 ring\, such as self-propelled particles\, flocking of birds\, milling of f
 ish. Modeling interacting particle systems by a system of differential equ
 ations plays an essential role in exploring how individual behavior engend
 ers collective behaviors\, which is one of the most fundamental and import
 ant problems in various disciplines.  Although the recent theoretical and 
 numerical study bring a flood of models that can reproduce many macroscopi
 cal qualitative collective patterns of the observed dynamics\, the quantit
 ative study towards matching the well-developed models  to observational d
 ata is scarce. \n\nWe consider the data-driven discovery of macroscopic pa
 rticle models with latent interactions. We propose a learning approach tha
 t models the latent interactions as Gaussian processes\, which provides an
  uncertainty-aware modeling of interacting particle systems. We introduce 
 an operator-theoretic framework to provide a detailed analysis of recovera
 bility conditions\, and establish statistical optimality of the proposed a
 pproach.  Numerical results on prototype systems and real data demonstrate
  the effectiveness of the proposed approach.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/74/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Krutika Tawri (University of California\, Berkeley)
DTSTART:20220914T231000Z
DTEND:20220915T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/75
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/75/">On stochastic partial differential equations with a Ladyzenskaya-
 Smagorinsky type nonlinearity</a>\nby Krutika Tawri (University of Califor
 nia\, Berkeley) as part of Berkeley applied mathematics seminar\n\nLecture
  held in 939 Evans Hall.\n\nAbstract\nThe theory of monotone operators pla
 ys a central role in many areas of nonlinear analysis. Monotone operators 
 often appear in fluid dynamics\, for example the p-Laplacian appears in a 
 non-Newtonian variant of the Navier-Stokes equations modeled by Ladyzenska
 ya or in the Smagorinsky model of turbulence. In this talk\, we will discu
 ss global existence results of both martingale and pathwise solutions of s
 tochastic equations with a monotone operator\, of the Ladyzenskaya-Smagori
 nsky type\, driven by a general Levy noise. The classical approach based o
 n using directly the Galerkin approximation is not valid. In this talk we 
 will discuss how one can approximate a monotone operator by a family of mo
 notone operators acting in a Hilbert space\, so as to recover certain usef
 ul properties of the orthogonal projectors and overcome the challenges fac
 ed while applying the Galerkin scheme.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/75/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yonah Borns-Weil (University of California\, Berkeley)
DTSTART:20221102T231000Z
DTEND:20221103T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/76
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/76/">Observable Trotter error bounds in the semiclassical regime</a>\n
 by Yonah Borns-Weil (University of California\, Berkeley) as part of Berke
 ley applied mathematics seminar\n\n\nAbstract\nThe Trotter product formula
  is perhaps the oldest and most well-known method for computing Schröding
 er propagators. We consider its application to the semiclassical Schroding
 er equation where the parameter $h$ is taken to be very small. If one wish
 es to do practical computations in such a regime\, they must take at least
  $O(h^{-1})$ spatial grid points\, which gives the Hamiltonian terms and t
 heir nested commutators to be of norm O(h^{-1}). This would appear to caus
 e serious trouble for both Trotter and post-Trotter methods\, as their tim
 e complexity depends on such norms.\n\nThe issue resolves itself when we c
 onsider approximating the propagator in observable norm\, which measures h
 ow much an observable propagated via the actual Hamiltonian differs from o
 ne propagated by our Trotter approximation. By a simple argument using Ego
 rov's theorem from semiclasscial analysis\, we show the error in this norm
  to be uniform in the semiclassical parameter $h$. In addition\, we consid
 er the discretized space case of interest in quantum computing\, and use d
 iscrete microlocal analysis on the quantized torus to extend our results t
 o this case without added error.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/76/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Govind Menon (Brown University)
DTSTART:20230121T001000Z
DTEND:20230121T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/77
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/77/">Stochastic Nash evolution</a>\nby Govind Menon (Brown University)
  as part of Berkeley applied mathematics seminar\n\n\nAbstract\nAbout ten 
 years ago\, De Lellis and Szekelyhidi made the surprising discovery that N
 ash’s results on the isometric embedding problem for Riemannian manifold
 scould be adapted to construct counterintuitive solutions to the Euler equ
 ations for incompressible flow. Their work shed new light on turbulence an
 d nonlinear PDE. We use this link in the other direction\, transferring id
 eas from turbulence to geometry.\n\nA thermodynamic framework is introduce
 d that connects two problems previously thought to be distinct: the isomet
 ric embedding problem for Riemannian manifolds and the construction of Bro
 wnian motion on Riemannian manifolds. This link is used to introduce a geo
 metric stochastic flow that we term stochastic Nash evolution.\n\nThese id
 eas will be explained in a (hopefully) elementary manner. My main goal is 
 to present the stochastic flows in a manner that is suited to implementati
 ons by modifications of level set methods. The absence of numerical comput
 ations of isometric embeddings is an important gap in our understanding.\n
 \nThis is joint work with Dominik Inauen (University of Leipzig).\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/77/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Anuj Kumar (UC Santa Cruz)
DTSTART:20230126T001000Z
DTEND:20230126T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/78
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/78/">Application of branching flows to optimal scalar transport and a 
 result concerning the nonuniqueness of trajectories</a>\nby Anuj Kumar (UC
  Santa Cruz) as part of Berkeley applied mathematics seminar\n\nAbstract: 
 TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/78/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Michael Albergo (New York University)
DTSTART:20230223T001000Z
DTEND:20230223T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/79
DESCRIPTION:by Michael Albergo (New York University) as part of Berkeley a
 pplied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/79/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Xiantao Li (Penn State University)
DTSTART:20230302T001000Z
DTEND:20230302T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/80
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/80/">Efficient algorithms for quantum optimal control problems</a>\nby
  Xiantao Li (Penn State University) as part of Berkeley applied mathematic
 s seminar\n\n\nAbstract\nMany recent developments in chemistry and materia
 l science utilize systems that exhibit unique quantum properties. A quantu
 m optimal control strategy can maximize the performance of electronic devi
 ces that rely on quantum properties\, e.g.\, minimizing the currents in mo
 lecular junctions. Computationally\, solving the control problem requires 
 visiting the time-dependent Schrödinger equation frequently\, and the cor
 responding solutions will be combined with an optimization method. In this
  talk\, we examine the overall approximation error and estimate the comple
 xity given the error tolerance. We focus on various methods for integratin
 g optimization algorithms and Hamiltonian simulations to achieve provable 
 accuracy.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/80/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Fanhui Xu (Harvard University)
DTSTART:20230315T231000Z
DTEND:20230316T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/81
DESCRIPTION:by Fanhui Xu (Harvard University) as part of Berkeley applied 
 mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/81/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Chi-Fang Chen (Caltech)
DTSTART:20230322T231000Z
DTEND:20230323T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/82
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/82/">Sparse random Hamiltonians are quantumly easy</a>\nby Chi-Fang Ch
 en (Caltech) as part of Berkeley applied mathematics seminar\n\n\nAbstract
 \nA candidate application for quantum computers is to simulate the low-tem
 perature properties of quantum systems. For this task\, there is a well-st
 udied quantum algorithm that performs quantum phase estimation on an initi
 al trial state that has a nonnegligible overlap with a low-energy state. H
 owever\, it is notoriously hard to give theoretical guarantees that such a
  trial state can be prepared efficiently. Moreover\, the heuristic proposa
 ls that are currently available\, such as with adiabatic state preparation
 \, appear insufficient in practical cases. This paper shows that\, for mos
 t random sparse Hamiltonians\, the maximally mixed state is a sufficiently
  good trial state\, and phase estimation efficiently prepares states with 
 energy arbitrarily close to the ground energy. Furthermore\, any low-energ
 y state must have nonnegligible quantum circuit complexity\, suggesting th
 at low-energy states are classically nontrivial and phase estimation is th
 e optimal method for preparing such states (up to polynomial factors). The
 se statements hold for two models of random Hamiltonians: (i) a sum of ran
 dom signed Pauli strings and (ii) a random signed d-sparse Hamiltonian. Th
 e main technical argument is based on some new results in nonasymptotic ra
 ndom matrix theory. In particular\, a refined concentration bound for the 
 spectral density is required to obtain complexity guarantees for these ran
 dom Hamiltonians.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/82/
END:VEVENT
BEGIN:VEVENT
SUMMARY:no seminar. spring break
DTSTART:20230329T231000Z
DTEND:20230330T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/83
DESCRIPTION:by no seminar. spring break as part of Berkeley applied mathem
 atics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/83/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yangwen Zhang (Carnegie Mellon University)
DTSTART:20230405T231000Z
DTEND:20230406T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/84
DESCRIPTION:by Yangwen Zhang (Carnegie Mellon University) as part of Berke
 ley applied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/84/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Sandeep Sharma (University of Colorado Boulder)
DTSTART:20230412T231000Z
DTEND:20230413T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/85
DESCRIPTION:by Sandeep Sharma (University of Colorado Boulder) as part of 
 Berkeley applied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/85/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Uros Seljak (UC Berkeley)
DTSTART:20230419T231000Z
DTEND:20230420T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/86
DESCRIPTION:by Uros Seljak (UC Berkeley) as part of Berkeley applied mathe
 matics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/86/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Aleksandar Donev (Courant Institute)
DTSTART:20230317T231000Z
DTEND:20230318T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/87
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/87/">Hydrodynamics and rheology of fluctuating\, semiflexible\, inexte
 nsible\, and slender filaments in Stokes flow</a>\nby Aleksandar Donev (Co
 urant Institute) as part of Berkeley applied mathematics seminar\n\nAbstra
 ct: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/87/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Zhiyan Ding (UC Berkeley)
DTSTART:20230209T001000Z
DTEND:20230209T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/88
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/88/">Mean-field analysis of interacting particle system and overparame
 terization of neural network</a>\nby Zhiyan Ding (UC Berkeley) as part of 
 Berkeley applied mathematics seminar\n\n\nAbstract\nThe interacting partic
 le system is a dynamic system that contains a lot of interacting particles
 . Because of the interaction between different particles\, the direct anal
 ysis and simulation of the system are very difficult. The mean-field analy
 sis is a framework for analyzing these large interacting particle systems.
  In this framework\, instead of directly studying the coupled system\, one
  approximates the system by a partial differential equation whose solution
  characterizes the distribution of the particles. This strategy largely si
 mplifies the problem and provides a more efficient way to study the evolut
 ion of the particle system. In this talk\, I will mainly focus on the deri
 vation of the mean-field analysis and its application in analyzing overpar
 ameterization of neural network.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/88/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Uros Seljak (UC Berkeley)
DTSTART:20230216T001000Z
DTEND:20230216T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/89
DESCRIPTION:by Uros Seljak (UC Berkeley) as part of Berkeley applied mathe
 matics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/89/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Julian Urban (MIT)
DTSTART:20230309T001000Z
DTEND:20230309T010000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/90
DESCRIPTION:by Julian Urban (MIT) as part of Berkeley applied mathematics 
 seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/90/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Yuehaw Khoo (University of Chicago)
DTSTART:20230426T231000Z
DTEND:20230427T000000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/91
DESCRIPTION:by Yuehaw Khoo (University of Chicago) as part of Berkeley app
 lied mathematics seminar\n\nAbstract: TBA\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/91/
END:VEVENT
BEGIN:VEVENT
SUMMARY:Eun-Jae Park (Yonsei University)
DTSTART:20230615T173000Z
DTEND:20230615T183000Z
DTSTAMP:20260422T212905Z
UID:BerekelyApplied/92
DESCRIPTION:Title: <a href="https://researchseminars.org/talk/BerekelyAppl
 ied/92/">Polygonal Staggered Galerkin Methods</a>\nby Eun-Jae Park (Yonsei
  University) as part of Berkeley applied mathematics seminar\n\n\nAbstract
 \nIn this talk\, we first present the staggered discontinuous Galerkin met
 hod on general meshes for the Poisson equation. Adaptive mesh refinement i
 s an attractive tool for general meshes due to their flexibility and simpl
 icity in handling hanging nodes. We derive a simple residual-type error es
 timator. Numerical results indicate that optimal convergence can be achiev
 ed for both the potential and vector variables\, and the singularity can b
 e well-captured by the proposed error estimator. Then\, some applications 
 to interface problems are considered such as coupling of Darcy-Forchheimer
  and Stokes equations\, and a single-phase flow in porous media with a fra
 cture. In the case of s fractured porous media\, the bulk variables are so
 lved using staggered DG method and an interface variable is solved using t
 he continuous Galerkin method. We derive optimal convergence for both pres
 sure and velocity fields. Numerical experiments suggest that our method is
  more accurate when polygonal meshes are used among various mesh configura
 tions\; moreover\, our method is robust to mesh distortion. These observat
 ions allow us to consider unfitted methods without any special treatment. 
 With background meshes generated independent of fracture\, numerical solut
 ions converge in optimal order.\n\nThis is joint work with Eric Chung\, Do
 hyun Kim\, and Lina Zhao.\n
LOCATION:https://researchseminars.org/talk/BerekelyApplied/92/
END:VEVENT
END:VCALENDAR
